RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 ZNF687Q8N1G0 1237 aa17.24■□□□□ 0.35
HERPUD1-205ENST00000562914 FAM3CQ92520 227 aa17.24■□□□□ 0.35
HERPUD1-205ENST00000562914 SUSD3Q96L08 255 aa17.24■□□□□ 0.35
HERPUD1-205ENST00000562914 ARHGAP28Q9P2N2 729 aa17.24■□□□□ 0.35
HERPUD1-205ENST00000562914 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
HERPUD1-205ENST00000562914 FBXL5Q9UKA1 691 aa17.24■□□□□ 0.35
HERPUD1-205ENST00000562914 USP18Q9UMW8 372 aa17.24■□□□□ 0.35
HERPUD1-205ENST00000562914 GPR179Q6PRD1 2367 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 SHISA7A6NL88 538 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 CCDC169A6NNP5 214 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 FOXD2O60548 495 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 PROZP22891 400 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 NPTX2P47972 431 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 ARPP19P56211 112 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 PEX3P56589 373 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 GRM2Q14416 872 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 ZNF174Q15697 407 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 TSSK4Q6SA08 328 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 MPZL3Q6UWV2 235 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 CEP120Q8N960 986 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 TCHPQ9BT92 498 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 TIPINQ9BVW5 301 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 ASAH2Q9NR71 780 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 NDRG2Q9UN36 371 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 KIAA1024Q9UPX6 916 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
HERPUD1-205ENST00000562914 ZNF263O14978 683 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 SEC24AO95486 1093 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 TDGF1P13385 188 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 TGM1P22735 817 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 GDI1P31150 447 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 CNR2P34972 360 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 FOSBP53539 338 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 PLD1Q13393 1074 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 POTEHQ6S545 545 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 VITQ6UXI7 678 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 MFSD6LQ8IWD5 586 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 TCEAL4Q96EI5 215 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 ZMAT2Q96NC0 199 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 KMT5AQ9NQR1 393 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 PIAS3Q9Y6X2 628 aa17.22■□□□□ 0.35
HERPUD1-205ENST00000562914 RETP07949 1114 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 MCM4P33991 863 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 CCR2P41597 374 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 NEK4P51957 841 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 OSTNP61366 133 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 LRRC32Q14392 662 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 DDX12PQ92771 950 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 NTPCRQ9BSD7 190 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 TARS2Q9BW92 718 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 LMAN1LQ9HAT1 526 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 NCOR2Q9Y618 2525 aa17.21■□□□□ 0.35
HERPUD1-205ENST00000562914 LAD1O00515 517 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 TOM1L1O75674 476 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 PAPSS2O95340 614 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 CPB1P15086 417 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 CXCL12P48061 93 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 GUCY1B3Q02153 619 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 TWF1Q12792 350 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 STRN3Q13033 797 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 ECM1Q16610 540 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 KRT79Q5XKE5 535 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 BEST2Q8NFU1 509 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 NETO1Q8TDF5 533 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 CSGALNACT1Q8TDX6 532 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 C8orf33Q9H7E9 229 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 PLEKHA5Q9HAU0 1116 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 CEP72Q9P209 647 aa17.2■□□□□ 0.34
HERPUD1-205ENST00000562914 COL4A2P08572 1712 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 ABLIM1O14639 778 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 CHADO15335 359 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 HIP1RO75146 1068 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 OAZ2O95190 189 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 CHRNB1P11230 501 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 MYL4P12829 197 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 SMTNP53814 917 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 YWHAHQ04917 246 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 ZPBP2Q6X784 338 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 TAS1R3Q7RTX0 852 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 YAF2Q8IY57 180 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 DAW1Q8N136 415 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
HERPUD1-205ENST00000562914 CNTNAP3BQ96NU0 1288 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms