RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MRPL17Q9NRX2 175 aaKnown RBP18.01■□□□□ 0.47
CDT1-202ENST00000562747 CHST7Q9NS84 486 aa18.01■□□□□ 0.47
CDT1-202ENST00000562747 USTQ9Y2C2 406 aa18.01■□□□□ 0.47
CDT1-202ENST00000562747 PRR23AA6NEV1 266 aa18■□□□□ 0.47
CDT1-202ENST00000562747 LILRB3O75022 631 aa18■□□□□ 0.47
CDT1-202ENST00000562747 ZNF202O95125 648 aa18■□□□□ 0.47
CDT1-202ENST00000562747 GARTP22102 1010 aa18■□□□□ 0.47
CDT1-202ENST00000562747 RPL9P32969 192 aaKnown RBP18■□□□□ 0.47
CDT1-202ENST00000562747 NBL1P41271 181 aa18■□□□□ 0.47
CDT1-202ENST00000562747 GLUD2P49448 558 aa18■□□□□ 0.47
CDT1-202ENST00000562747 CLCN4P51793 760 aa18■□□□□ 0.47
CDT1-202ENST00000562747 CLCNKBP51801 687 aa18■□□□□ 0.47
CDT1-202ENST00000562747 DSG1Q02413 1049 aa18■□□□□ 0.47
CDT1-202ENST00000562747 SOX4Q06945 474 aaPredicted RBP18■□□□□ 0.47
CDT1-202ENST00000562747 ELAVL2Q12926 359 aaKnown RBP18■□□□□ 0.47
CDT1-202ENST00000562747 USP41Q3LFD5 358 aa18■□□□□ 0.47
CDT1-202ENST00000562747 KRBA2Q6ZNG9 492 aa18■□□□□ 0.47
CDT1-202ENST00000562747 TAS1R1Q7RTX1 841 aa18■□□□□ 0.47
CDT1-202ENST00000562747 TMEM87AQ8NBN3 555 aa18■□□□□ 0.47
CDT1-202ENST00000562747 GLIS3Q8NEA6 775 aa18■□□□□ 0.47
CDT1-202ENST00000562747 ZNF507Q8TCN5 953 aa18■□□□□ 0.47
CDT1-202ENST00000562747 CCDC34Q96HJ3 373 aa18■□□□□ 0.47
CDT1-202ENST00000562747 KLHL5Q96PQ7 755 aa18■□□□□ 0.47
CDT1-202ENST00000562747 EMILIN2Q9BXX0 1053 aa18■□□□□ 0.47
CDT1-202ENST00000562747 IKZF4Q9H2S9 585 aa18■□□□□ 0.47
CDT1-202ENST00000562747 SFXN1Q9H9B4 322 aa18■□□□□ 0.47
CDT1-202ENST00000562747 GOLGA2P5Q9HBQ8 144 aa18■□□□□ 0.47
CDT1-202ENST00000562747 CHMP5Q9NZZ3 219 aa18■□□□□ 0.47
CDT1-202ENST00000562747 LACTBL1A8MY62 500 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 XPOTO43592 962 aaKnown RBP17.99■□□□□ 0.47
CDT1-202ENST00000562747 KLRC4O43908 158 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 B3GAT3O94766 335 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 LDHAP00338 332 aaKnown RBP17.99■□□□□ 0.47
CDT1-202ENST00000562747 CNPP09543 421 aaKnown RBP17.99■□□□□ 0.47
CDT1-202ENST00000562747 ACOT2P49753 483 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 PSMD2Q13200 908 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 KIAA0319Q5VV43 1072 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 GPR149Q86SP6 731 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 HASPINQ8TF76 798 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 EXOC1Q9NV70 894 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 UBQLN1Q9UMX0 589 aaKnown RBP17.99■□□□□ 0.47
CDT1-202ENST00000562747 SPTBN4Q9H254 2564 aa17.99■□□□□ 0.47
CDT1-202ENST00000562747 PODXLO00592 558 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 KIAA0391O15091 583 aaKnown RBP17.98■□□□□ 0.47
CDT1-202ENST00000562747 PI15O43692 258 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 N4BP1O75113 896 aaKnown RBP17.98■□□□□ 0.47
CDT1-202ENST00000562747 NPR3P17342 541 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 CYP3A5P20815 502 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 ZBTB6Q15916 424 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 ARMCX5Q6P1M9 558 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 FRMD5Q7Z6J6 570 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 PPFIBP1Q86W92 1011 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 PLCD3Q8N3E9 789 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 C18orf25Q96B23 403 aaPredicted RBP17.98■□□□□ 0.47
CDT1-202ENST00000562747 KIF12Q96FN5 646 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 MFSD1Q9H3U5 465 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 ASB7Q9H672 318 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.98■□□□□ 0.47
CDT1-202ENST00000562747 DERAQ9Y315 318 aa17.98■□□□□ 0.47
CDT1-202ENST00000562747 VPS13AQ96RL7 3174 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 C2CD2LO14523 706 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 TRAPPC3O43617 180 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 LRPAP1P30533 357 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 HOXD13P35453 343 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 SNRPFP62306 86 aaKnown RBP17.97■□□□□ 0.47
CDT1-202ENST00000562747 CREMQ03060 361 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 BMT2Q1RMZ1 405 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 KMT5BQ4FZB7 885 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 CD300LGQ6UXG3 332 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 CRELD2Q6UXH1 353 aaPredicted RBP17.97■□□□□ 0.47
CDT1-202ENST00000562747 CCDC149Q6ZUS6 474 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 FMR1NBQ8N0W7 255 aaPredicted RBP17.97■□□□□ 0.47
CDT1-202ENST00000562747 FLCNQ8NFG4 579 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 SCFD1Q8WVM8 642 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 CCDC47Q96A33 483 aaKnown RBP17.97■□□□□ 0.47
CDT1-202ENST00000562747 FAM212AQ96EL1 285 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 CBWD1Q9BRT8 395 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 RXFP1Q9HBX9 757 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 SLC39A2Q9NP94 309 aa17.97■□□□□ 0.47
CDT1-202ENST00000562747 IL18RAPO95256 599 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 RPN1P04843 607 aaKnown RBP17.96■□□□□ 0.47
CDT1-202ENST00000562747 KLRC2P26717 231 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 CLCN5P51795 746 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 SPAG1Q07617 926 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 DPYDQ12882 1025 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 FAM171A1Q5VUB5 890 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 JADE1Q6IE81 842 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 PDXDC1Q6P996 788 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.96■□□□□ 0.47
CDT1-202ENST00000562747 C3orf58Q8NDZ4 430 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 FAM213AQ9BRX8 229 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 TTPALQ9BTX7 342 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 FNIP2Q9P278 1114 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 TUBGCP4Q9UGJ1 667 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 C2CD2Q9Y426 696 aa17.96■□□□□ 0.47
CDT1-202ENST00000562747 ANK1P16157 1881 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 SPDYE4A6NLX3 237 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 NARSO43776 548 aaKnown RBP17.95■□□□□ 0.46
CDT1-202ENST00000562747 EXTL3O43909 919 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 C1RP00736 705 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms