RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PPP1R9AQ9ULJ8 1098 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 PHTF1Q9UMS5 762 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 FZD1Q9UP38 647 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 STARD13Q9Y3M8 1113 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 PVALEFA0A1B0GWK0 134 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 PTGIRP43119 386 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SPIRE1Q08AE8 756 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 TTLL12Q14166 644 aaPredicted RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 ZCWPW2Q504Y3 356 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 HERC4Q5GLZ8 1057 aaPredicted RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SRRM1Q8IYB3 904 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 DNAJC1Q96KC8 554 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SLCO1B3Q9NPD5 702 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 OSGEPQ9NPF4 335 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 PAIP2BQ9ULR5 123 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 WASF2Q9Y6W5 498 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 ACTN1P12814 892 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 ZNF24P17028 368 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 PLOD1Q02809 727 aaPredicted RBP14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 MOGSQ13724 837 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 DUS1LQ6P1R4 473 aaKnown RBP14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 WDR60Q8WVS4 1066 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 CCDC28BQ9BUN5 200 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 CDC42EP4Q9H3Q1 356 aaKnown RBP14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 PIM2Q9P1W9 311 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 STX18Q9P2W9 335 aaKnown RBP14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 TUBGCP4Q9UGJ1 667 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 FAM170AA1A519 330 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 ZBTB39O15060 712 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 DDX3YO15523 660 aaKnown RBP14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 EPS15P42566 896 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 HPCAP84074 193 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 IL9RQ01113 521 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 ARSHQ5FYA8 562 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 SAMD7Q7Z3H4 446 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 KSR1Q8IVT5 923 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 CYP4X1Q8N118 509 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 SLC35B4Q969S0 331 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 GLT8D2Q9H1C3 349 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 GANQ9H2C0 597 aa14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 DDX43Q9NXZ2 648 aaKnown RBP14.87□□□□□ -0.03
GTF3C1-203ENST00000562609 CYP3A7-CYP3A51PA0A087WV96 503 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 EML1O00423 815 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 CYP3A7P24462 503 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 SREBF1P36956 1147 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 CAP2P40123 477 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 TMED1Q13445 227 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 FAM26FQ5R3K3 315 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 PRAMEF18Q5VWM3 479 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 AADACL2Q6P093 401 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 ST13P4Q8IZP2 240 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 HAUS1Q96CS2 278 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 SYNCQ9H7C4 482 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 MYOZ2Q9NPC6 264 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 PKD2L1Q9P0L9 805 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 ZFP69BQ9UJL9 534 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 SFI1A8K8P3 1242 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 ANKRD63C9JTQ0 380 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 SPATA31C1P0DKV0 1188 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 CYP11B2P19099 503 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 CFAP157Q5JU67 520 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 IZUMO2Q6UXV1 221 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 ARMCX6Q7L4S7 300 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 CPXCR1Q8N123 301 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 JDP2Q8WYK2 163 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 ZNF653Q96CK0 615 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 ZNF341Q9BYN7 854 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 ZNF212Q9UDV6 495 aa14.86□□□□□ -0.03
GTF3C1-203ENST00000562609 PABPC4LP0CB38 370 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 CASP5P51878 434 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 FKBP3Q00688 224 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 PPP1R21Q6ZMI0 780 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 SLFN12Q8IYM2 578 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 MYOCDQ8IZQ8 938 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 NME8Q8N427 588 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 WDR18Q9BV38 432 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 HOMER2Q9NSB8 354 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 CLIC5Q9NZA1 410 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 BCS1LQ9Y276 419 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 WDR37Q9Y2I8 494 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 PTPN22Q9Y2R2 807 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 RSPH10B2B2RC85 870 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 PODXLO00592 558 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 EXOC3O60645 756 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 OPHN1O60890 802 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 PHF2O75151 1096 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 RSPH10BP0C881 870 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 WDR4P57081 412 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 PPP2R5CQ13362 524 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 CTTNQ14247 550 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 CIAPIN1Q6FI81 312 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 TTC27Q6P3X3 843 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 TRMT10CQ7L0Y3 403 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 TRMT1LQ7Z2T5 733 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 U2AF1L4Q8WU68 220 aaKnown RBP14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 TAOK3Q9H2K8 898 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 PCDH18Q9HCL0 1135 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms