RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 ITGB3P05106 788 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 CCDC192P0DO97 292 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 CTSAP10619 480 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 GTF2H1P32780 548 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 GUCY2FP51841 1108 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 LILRA4P59901 499 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 ERVFC1P60507 584 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 RNF168Q8IYW5 571 aaPredicted RBP17.66■□□□□ 0.42
USB1-206ENST00000562534 C1orf127Q8N9H9 656 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 OR5B17Q8NGF7 314 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 PLEKHO2Q8TD55 490 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 GUCD1Q96NT3 240 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 TCF25Q9BQ70 676 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 MTMR12Q9C0I1 747 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 NAT10Q9H0A0 1025 aaKnown RBP17.66■□□□□ 0.42
USB1-206ENST00000562534 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
USB1-206ENST00000562534 CHST7Q9NS84 486 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 MTCH2Q9Y6C9 303 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 NLRC5Q86WI3 1866 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 ARHGEF37A1IGU5 675 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 C4BPAP04003 597 aaKnown RBP17.65■□□□□ 0.42
USB1-206ENST00000562534 KRT19P08727 400 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 TAF6P49848 677 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 DLG4P78352 724 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 TYRO3Q06418 890 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 MYO1EQ12965 1108 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 TRPC3Q13507 836 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 ADGRE1Q14246 886 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 SMC1AQ14683 1233 aaKnown RBP17.65■□□□□ 0.42
USB1-206ENST00000562534 CCDC40Q4G0X9 1142 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 LMBRD2Q68DH5 695 aaPredicted RBP17.65■□□□□ 0.42
USB1-206ENST00000562534 PDXDC1Q6P996 788 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 TAS1R1Q7RTX1 841 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 LRRC52Q8N7C0 313 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 MRPL43Q8N983 215 aaKnown RBP17.65■□□□□ 0.42
USB1-206ENST00000562534 C3orf58Q8NDZ4 430 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 ENOX1Q8TC92 643 aaKnown RBP17.65■□□□□ 0.42
USB1-206ENST00000562534 HASPINQ8TF76 798 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 PPP2R3CQ969Q6 453 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 SUSD3Q96L08 255 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 MED15Q96RN5 788 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 ENTPD7Q9NQZ7 604 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
USB1-206ENST00000562534 IRAK3Q9Y616 596 aa17.65■□□□□ 0.42
USB1-206ENST00000562534 FSCN2O14926 492 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 SYN3O14994 580 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 CST3P01034 146 aaPredicted RBP17.64■□□□□ 0.41
USB1-206ENST00000562534 FOSL2P15408 326 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 POLR2BP30876 1174 aaKnown RBP17.64■□□□□ 0.41
USB1-206ENST00000562534 MARSP56192 900 aaKnown RBP17.64■□□□□ 0.41
USB1-206ENST00000562534 DSG1Q02413 1049 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 SV2CQ496J9 727 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 TIGD5Q53EQ6 642 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 KIAA0319Q5VV43 1072 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 DSTYKQ6XUX3 929 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.64■□□□□ 0.41
USB1-206ENST00000562534 SV2AQ7L0J3 742 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 CEP57Q86XR8 500 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 APPL2Q8NEU8 664 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 CXorf38Q8TB03 319 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 ZNF560Q96MR9 790 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 TTPALQ9BTX7 342 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 HERC2P3Q9BVR0 1158 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 VN1R3Q9BXE9 311 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 ZBP1Q9H171 429 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 THAP9Q9H5L6 903 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 PTPRJQ12913 1337 aa17.64■□□□□ 0.41
USB1-206ENST00000562534 KPNA7A9QM74 516 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 M0QZQ0 153 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 URODP06132 367 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 FGFR3P22607 806 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
USB1-206ENST00000562534 ATICP31939 592 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 BRCC3P46736 316 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 GLUD2P49448 558 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 AARSP49588 968 aaKnown RBP eCLIP17.63■□□□□ 0.41
USB1-206ENST00000562534 BIRC3Q13489 604 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 ZACNQ401N2 412 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 C1orf220Q5T0J3 134 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 FAM114A1Q8IWE2 563 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 NSUN3Q9H649 340 aaKnown RBP17.63■□□□□ 0.41
USB1-206ENST00000562534 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.63■□□□□ 0.41
USB1-206ENST00000562534 SIX4Q9UIU6 781 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 KIAA1671Q9BY89 1806 aa17.63■□□□□ 0.41
USB1-206ENST00000562534 SYCE3A1L190 88 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 PPEF2O14830 753 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 LILRB3O75022 631 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 IRS1P35568 1242 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 CREMQ03060 361 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 SGSM1Q2NKQ1 1148 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 KRT39Q6A163 491 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 C15orf39Q6ZRI6 1047 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 ANKS3Q6ZW76 656 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 CREBRFQ8IUR6 639 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms