RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ZNF555Q8NEP9 628 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
RPAP1-204ENST00000562303 DTNAQ9Y4J8 743 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 GMNCA6NCL1 334 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 FKBP9O95302 570 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 NR3C2P08235 984 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 MYBP10242 640 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 FGFR4P22455 802 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 MZF1P28698 734 aaPredicted RBP11.8□□□□□ -0.52
RPAP1-204ENST00000562303 RFC5P40937 340 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 LRRC23Q53EV4 343 aaPredicted RBP11.8□□□□□ -0.52
RPAP1-204ENST00000562303 RARS2Q5T160 578 aaKnown RBP11.8□□□□□ -0.52
RPAP1-204ENST00000562303 MFSD4BQ5TF39 518 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 PRAMEF18Q5VWM3 479 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 FKBP9P1Q75LS8 142 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 HES6Q96HZ4 224 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 MCEEQ96PE7 176 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 CAPN10Q9HC96 672 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 PRR23AA6NEV1 266 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 IL18RAPO95256 599 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 SLC25A27O95847 323 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 CHGBP05060 677 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 GSNP06396 782 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 NCALDP61601 193 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 DGKDQ16760 1214 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 ZRANB3Q5FWF4 1079 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 RNF180Q86T96 592 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 RBBP8NLQ8NC74 664 aaPredicted RBP11.8□□□□□ -0.52
RPAP1-204ENST00000562303 NAGPAQ9UK23 515 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 DAGLAQ9Y4D2 1042 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 TTC26A0AVF1 554 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 GRAP2O75791 330 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 PDHA1P08559 390 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 CPT1AP50416 773 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 GYS2P54840 703 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 ATF7IP2Q5U623 682 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 C12orf60Q5U649 245 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 RNPC3Q96LT9 517 aaKnown RBP11.8□□□□□ -0.52
RPAP1-204ENST00000562303 SLITRK1Q96PX8 696 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 TSC22D3Q99576 134 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 RAB6BQ9NRW1 208 aa11.8□□□□□ -0.52
RPAP1-204ENST00000562303 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
RPAP1-204ENST00000562303 EFCAB12Q6NXP0 572 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 DHX40Q8IX18 779 aaKnown RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 TASP1Q9H6P5 420 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 ACADSBP45954 432 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 ALDH7A1P49419 539 aaKnown RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 STAT4Q14765 748 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 KRT35Q92764 455 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 NT5C1AQ9BXI3 368 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 MAN1C1Q9NR34 630 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 HDAC6Q9UBN7 1215 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 ADGRA2Q96PE1 1338 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 CDH2P19022 906 aaPredicted RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 NEK2P51955 445 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 FCGRTP55899 365 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 KCNB1Q14721 858 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 SIRT2Q8IXJ6 389 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 TEX9Q8N6V9 391 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 ETNK1Q9HBU6 452 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 C20orf96Q9NUD7 363 aaPredicted RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 ZC3H7BQ9UGR2 993 aaKnown RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 NDUFB10O96000 172 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 ATP2C1P98194 919 aaPredicted RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 EIF2B5Q13144 721 aaKnown RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 PHKG1Q16816 387 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 SGO1Q5FBB7 561 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 TDRD10Q5VZ19 366 aaKnown RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 IPMKQ8NFU5 416 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 PPP1R2P1Q96PQ5 205 aa11.79□□□□□ -0.52
RPAP1-204ENST00000562303 XPO7Q9UIA9 1087 aaKnown RBP11.79□□□□□ -0.52
RPAP1-204ENST00000562303 CDC42BPGQ6DT37 1551 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 H0Y626 953 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 PRKCEQ02156 737 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 TMEM132BQ14DG7 1078 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 MDH1BQ5I0G3 518 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 FBXO38Q6PIJ6 1188 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 ARHGEF26Q96DR7 871 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 TMA16Q96EY4 203 aaKnown RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CRAMP1Q96RY5 1269 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 TRABDQ9H4I3 376 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 STN1Q9H668 368 aaKnown RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 PRG3Q9Y2Y8 225 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 TRIM16O95361 564 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 NPTXRO95502 500 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 FAM107AO95990 144 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CARSP49589 748 aaKnown RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 PMS1P54277 932 aaKnown RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 TP53BP2Q13625 1128 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CDH18Q13634 790 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 HIC1Q14526 733 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 PDIA5Q14554 519 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 SNRNP35Q16560 246 aaKnown RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 GLT1D1Q96MS3 346 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 BRD8Q9H0E9 1235 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 APEX2Q9UBZ4 518 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 MAGI2Q86UL8 1455 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms