RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZBTB10Q96DT7 871 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 FAM212AQ96EL1 285 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ZNF668Q96K58 619 aaPredicted RBP10.48□□□□□ -0.73
SMG1-205ENST00000561947 TRIM51Q9BSJ1 452 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 RNPEPQ9H4A4 650 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ZNF408Q9H9D4 720 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 RBM47A0AV96 593 aaKnown RBP10.47□□□□□ -0.73
SMG1-205ENST00000561947 GOLGA6CA6NDK9 693 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 ERICH4A6NGS2 130 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 B4GALT5O43286 388 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 THAP12O43422 761 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 CFHP08603 1231 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 HOXC6P09630 235 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 GOLGA6DP0CG33 693 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 CHRNA3P32297 505 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 MYL6P60660 151 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 PPFIA1Q13136 1202 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 GJC2Q5T442 439 aaPredicted RBP10.47□□□□□ -0.73
SMG1-205ENST00000561947 LIN9Q5TKA1 542 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 PPP1R2P3Q6NXS1 205 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 MAMDC4Q6UXC1 1216 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 PHF13Q86YI8 300 aaPredicted RBP10.47□□□□□ -0.73
SMG1-205ENST00000561947 SLC13A5Q86YT5 568 aaPredicted RBP10.47□□□□□ -0.73
SMG1-205ENST00000561947 PRELID2Q8N945 189 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 LRRC45Q96CN5 670 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 NFKBIZQ9BYH8 718 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 GOLGA6AQ9NYA3 693 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 PRDM4Q9UKN5 801 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 CCL15-CCL14A0A0B4J2E2 113 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 SLC1A1P43005 524 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 GTF2A2P52657 109 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 IGBP1P78318 339 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 CCL15Q16663 113 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 SGSM1Q2NKQ1 1148 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 EEF1DP3Q658K8 133 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
SMG1-205ENST00000561947 PASD1Q8IV76 773 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 CD302Q8IX05 232 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 THNSL1Q8IYQ7 743 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 ZDHHC14Q8IZN3 488 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 VCPIP1Q96JH7 1222 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 C11orf70Q9BRQ4 267 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 NIF3L1Q9GZT8 377 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 DPH5Q9H2P9 285 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 MORF4L1Q9UBU8 362 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 CLEC11AQ9Y240 323 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 TNFSF13BQ9Y275 285 aa10.47□□□□□ -0.73
SMG1-205ENST00000561947 INSRRP14616 1297 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 PTGIRP43119 386 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 TFAMQ00059 246 aaKnown RBP10.46□□□□□ -0.73
SMG1-205ENST00000561947 POU5F1BQ06416 359 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 TRPC3Q13507 836 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 CYP1B1Q16678 543 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 DUPD1Q68J44 220 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 JAMLQ86YT9 394 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 EFCAB13Q8IY85 973 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 PPTC7Q8NI37 304 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 FAM76AQ8TAV0 307 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 MAGOHBQ96A72 148 aaKnown RBP10.46□□□□□ -0.73
SMG1-205ENST00000561947 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.73
SMG1-205ENST00000561947 ERP44Q9BS26 406 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 TRIM7Q9C029 511 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 KATNBL1Q9H079 304 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 CDT1Q9H211 546 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 MINDY3Q9H8M7 445 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 PRMT7Q9NVM4 692 aaPredicted RBP10.46□□□□□ -0.73
SMG1-205ENST00000561947 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.46□□□□□ -0.73
SMG1-205ENST00000561947 ADAM22Q9P0K1 906 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 PCYOX1Q9UHG3 505 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 RASAL2Q9UJF2 1139 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 MTUS1Q9ULD2 1270 aa10.46□□□□□ -0.73
SMG1-205ENST00000561947 MYO1FO00160 1098 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 STRNO43815 780 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 B4GALT4O60513 344 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 TNNC2P02585 160 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 TMEM191BP0C7N4 346 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 SSTR3P32745 418 aaPredicted RBP10.46□□□□□ -0.74
SMG1-205ENST00000561947 PHKA2P46019 1235 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 GCLCP48506 637 aaPredicted RBP10.46□□□□□ -0.74
SMG1-205ENST00000561947 PTP4A2Q12974 167 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 C2CD6Q53TS8 623 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 TTMPQ5BVD1 217 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 ANKRD23Q86SG2 305 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 PHLDB2Q86SQ0 1253 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 LINC01465Q8N7H1 131 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 BRI3BPQ8WY22 251 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 ARL8AQ96BM9 186 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 C18orf8Q96DM3 657 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 PLVAPQ9BX97 442 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 COL1A2P08123 1366 aa10.46□□□□□ -0.74
SMG1-205ENST00000561947 MAGEB2O15479 319 aa10.45□□□□□ -0.74
SMG1-205ENST00000561947 PROSCO94903 275 aa10.45□□□□□ -0.74
SMG1-205ENST00000561947 HSD17B3P37058 310 aa10.45□□□□□ -0.74
SMG1-205ENST00000561947 C1QBPQ07021 282 aaKnown RBP10.45□□□□□ -0.74
SMG1-205ENST00000561947 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms