RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 STRBPQ96SI9 672 aaKnown RBP7.86□□□□□ -1.15
SMG1-204ENST00000561940 PSMD1Q99460 953 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 C22orf23Q9BZE7 217 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 TMPRSS5Q9H3S3 457 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 PARPBPQ9NWS1 579 aa7.86□□□□□ -1.15
SMG1-204ENST00000561940 AURKAIP1Q9NWT8 199 aaPredicted RBP7.86□□□□□ -1.15
SMG1-204ENST00000561940 CFAP69A5D8W1 941 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 PRR5-ARHGAP8B1AHC4 643 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 RPS6KA4O75676 772 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 GASTP01350 101 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 TYRP14679 529 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 SLC25A3Q00325 362 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 RAB39AQ14964 217 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 KRTAP5-3Q6L8H2 238 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 SLC35B2Q8TB61 432 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 LRTOMTQ8WZ04 291 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 CYFIP2Q96F07 1278 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 SLC2A4RGQ9NR83 387 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 SORCS3Q9UPU3 1222 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 RIPOR2Q9Y4F9 1068 aa7.85□□□□□ -1.15
SMG1-204ENST00000561940 GOLIM4O00461 696 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 LDHAP00338 332 aaKnown RBP7.84□□□□□ -1.15
SMG1-204ENST00000561940 CACNB3P54284 484 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 CSRP2Q16527 193 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 LONRF1Q17RB8 773 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 PDZD4Q76G19 769 aaPredicted RBP7.84□□□□□ -1.15
SMG1-204ENST00000561940 ZNF572Q7Z3I7 529 aaPredicted RBP7.84□□□□□ -1.15
SMG1-204ENST00000561940 RNF169Q8NCN4 708 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 OR52N2Q8NGI0 321 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 CACTINQ8WUQ7 758 aaKnown RBP7.84□□□□□ -1.15
SMG1-204ENST00000561940 MYOCQ99972 504 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 SCAND2PQ9GZW5 306 aaPredicted RBP7.84□□□□□ -1.15
SMG1-204ENST00000561940 TMEM140Q9NV12 185 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 POGKQ9P215 609 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 TAGLN3Q9UI15 199 aa7.84□□□□□ -1.15
SMG1-204ENST00000561940 REXO2Q9Y3B8 237 aaKnown RBP7.84□□□□□ -1.15
SMG1-204ENST00000561940 ATRNL1Q5VV63 1379 aa7.84□□□□□ -1.16
SMG1-204ENST00000561940 NT5C1B-RDH14C9J2C7 533 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 ALOX15P16050 662 aaPredicted RBP7.83□□□□□ -1.16
SMG1-204ENST00000561940 TUBA3CQ13748 450 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 TOB2Q14106 344 aaPredicted RBP7.83□□□□□ -1.16
SMG1-204ENST00000561940 FGL2Q14314 439 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 VPS72Q15906 364 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 AFMIDQ63HM1 303 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 TUBA3EQ6PEY2 450 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 PPP1R3BQ86XI6 285 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 SLC16A11Q8NCK7 471 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 CPT1CQ8TCG5 803 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 KCNH6Q9H252 994 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 ZNF703Q9H7S9 590 aaPredicted RBP7.83□□□□□ -1.16
SMG1-204ENST00000561940 PNPOQ9NVS9 261 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 CALCOCO1Q9P1Z2 691 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 FNIP2Q9P278 1114 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 EIF2B4Q9UI10 523 aaKnown RBP7.83□□□□□ -1.16
SMG1-204ENST00000561940 COMMD10Q9Y6G5 202 aa7.83□□□□□ -1.16
SMG1-204ENST00000561940 TBKBP1A7MCY6 615 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 F2RL2O00254 374 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 LEFTY2O00292 366 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 SCAF4O95104 1147 aaKnown RBP7.82□□□□□ -1.16
SMG1-204ENST00000561940 CD1AP06126 327 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 SBK3P0C264 359 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 APOBEC3AP31941 199 aaPredicted RBP7.82□□□□□ -1.16
SMG1-204ENST00000561940 CTXN1P60606 82 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 OS9Q13438 667 aaPredicted RBP7.82□□□□□ -1.16
SMG1-204ENST00000561940 FLYWCH1Q4VC44 716 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 DCAF17Q5H9S7 520 aaPredicted RBP7.82□□□□□ -1.16
SMG1-204ENST00000561940 RABL3Q5HYI8 236 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 DOK3Q7L591 496 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 MORC1Q86VD1 984 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 ZFPM1Q8IX07 1006 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 CASKIN2Q8WXE0 1202 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 TFAP2CQ92754 450 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 PHACTR3Q96KR7 559 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 TBCBQ99426 244 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 ELAC2Q9BQ52 826 aaKnown RBP7.82□□□□□ -1.16
SMG1-204ENST00000561940 C1orf43Q9BWL3 253 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 KLHL11Q9NVR0 708 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 SLC23A1Q9UHI7 598 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 FEZ2Q9UHY8 353 aaPredicted RBP7.82□□□□□ -1.16
SMG1-204ENST00000561940 CPA4Q9UI42 421 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 DAAM1Q9Y4D1 1078 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 PCDHA1Q9Y5I3 950 aa7.82□□□□□ -1.16
SMG1-204ENST00000561940 ZNF202O95125 648 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 AHSGP02765 367 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 RAP2AP10114 183 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 KITP10721 976 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 RAP2BP61225 183 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 GPSM2P81274 684 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 C10orf62Q5T681 223 aaPredicted RBP7.81□□□□□ -1.16
SMG1-204ENST00000561940 FNDC7Q5VTL7 733 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 HTR3DQ70Z44 454 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 GPRIN1Q7Z2K8 1008 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 SKAP1Q86WV1 359 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 EXOC8Q8IYI6 725 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 IL31RAQ8NI17 732 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 MORC4Q8TE76 937 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 ZNF768Q9H5H4 540 aaKnown RBP7.81□□□□□ -1.16
SMG1-204ENST00000561940 RSAD1Q9HA92 442 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 PCDHA6Q9UN73 950 aa7.81□□□□□ -1.16
SMG1-204ENST00000561940 USP19O94966 1318 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms