RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 DDIT3P35638 169 aa27.57■■■□□ 2
NME3-202ENST00000561637 PUM1Q14671 1186 aaKnown RBP eCLIP27.57■■■□□ 2
NME3-202ENST00000561637 FOXD4L5Q5VV16 416 aaPredicted RBP27.57■■■□□ 2
NME3-202ENST00000561637 ELMSAN1Q6PJG2 1045 aa27.57■■■□□ 2
NME3-202ENST00000561637 GET4Q7L5D6 327 aaPredicted RBP27.57■■■□□ 2
NME3-202ENST00000561637 FOXD4L4Q8WXT5 416 aaPredicted RBP27.57■■■□□ 2
NME3-202ENST00000561637 STAMQ92783 540 aa27.57■■■□□ 2
NME3-202ENST00000561637 RHOBTB2Q9BYZ6 727 aa27.57■■■□□ 2
NME3-202ENST00000561637 PANK2Q9BZ23 570 aa27.57■■■□□ 2
NME3-202ENST00000561637 DPP7Q9UHL4 492 aa27.57■■■□□ 2
NME3-202ENST00000561637 SIT1Q9Y3P8 196 aa27.57■■■□□ 2
NME3-202ENST00000561637 ANKRD63C9JTQ0 380 aa27.56■■■□□ 2
NME3-202ENST00000561637 C1RP00736 705 aa27.56■■■□□ 2
NME3-202ENST00000561637 PIGRP01833 764 aa27.56■■■□□ 2
NME3-202ENST00000561637 GLULP15104 373 aa27.56■■■□□ 2
NME3-202ENST00000561637 RAB33AQ14088 237 aa27.56■■■□□ 2
NME3-202ENST00000561637 ENOX2Q16206 610 aaKnown RBP27.56■■■□□ 2
NME3-202ENST00000561637 PHLDB3Q6NSJ2 640 aa27.56■■■□□ 2
NME3-202ENST00000561637 SFR1Q86XK3 245 aa27.56■■■□□ 2
NME3-202ENST00000561637 C1orf210Q8IVY1 113 aa27.56■■■□□ 2
NME3-202ENST00000561637 SLC7A14Q8TBB6 771 aa27.56■■■□□ 2
NME3-202ENST00000561637 KCNN1Q92952 543 aa27.56■■■□□ 2
NME3-202ENST00000561637 ARHGEF3Q9NR81 526 aa27.56■■■□□ 2
NME3-202ENST00000561637 DLL3Q9NYJ7 618 aa27.56■■■□□ 2
NME3-202ENST00000561637 KCNG1Q9UIX4 513 aa27.56■■■□□ 2
NME3-202ENST00000561637 TTC26A0AVF1 554 aa27.55■■■□□ 2
NME3-202ENST00000561637 MYMKA6NI61 221 aa27.55■■■□□ 2
NME3-202ENST00000561637 LACTBL1A8MY62 500 aa27.55■■■□□ 2
NME3-202ENST00000561637 LRRN2O75325 713 aa27.55■■■□□ 2
NME3-202ENST00000561637 CLTAP09496 248 aa27.55■■■□□ 2
NME3-202ENST00000561637 VARS2Q5ST30 1063 aaKnown RBP27.55■■■□□ 2
NME3-202ENST00000561637 LIN9Q5TKA1 542 aa27.55■■■□□ 2
NME3-202ENST00000561637 CYP26C1Q6V0L0 522 aa27.55■■■□□ 2
NME3-202ENST00000561637 GRASPQ7Z6J2 395 aaPredicted RBP27.55■■■□□ 2
NME3-202ENST00000561637 RUBCNQ92622 972 aa27.55■■■□□ 2
NME3-202ENST00000561637 NXPE3Q969Y0 559 aa27.55■■■□□ 2
NME3-202ENST00000561637 FOXQ1Q9C009 403 aa27.55■■■□□ 2
NME3-202ENST00000561637 H0YCG3 227 aa27.54■■■□□ 2
NME3-202ENST00000561637 LAMP2P13473 410 aa27.54■■■□□ 2
NME3-202ENST00000561637 SLC39A14Q15043 492 aa27.54■■■□□ 2
NME3-202ENST00000561637 PPM1LQ5SGD2 360 aa27.54■■■□□ 2
NME3-202ENST00000561637 AXDND1Q5T1B0 1012 aaPredicted RBP27.54■■■□□ 2
NME3-202ENST00000561637 KIF12Q96FN5 646 aa27.54■■■□□ 2
NME3-202ENST00000561637 HCFC1R1Q9NWW0 138 aa27.54■■■□□ 2
NME3-202ENST00000561637 BACE2Q9Y5Z0 518 aa27.54■■■□□ 2
NME3-202ENST00000561637 GPR179Q6PRD1 2367 aa27.53■■■□□ 2
NME3-202ENST00000561637 PATJQ8NI35 1801 aa27.53■■■□□ 2
NME3-202ENST00000561637 PPEF2O14830 753 aa27.53■■■□□ 2
NME3-202ENST00000561637 GTF2BQ00403 316 aa27.53■■■□□ 2
NME3-202ENST00000561637 HTR4Q13639 388 aa27.53■■■□□ 2
NME3-202ENST00000561637 RRAGBQ5VZM2 374 aa27.53■■■□□ 2
NME3-202ENST00000561637 PDXDC1Q6P996 788 aa27.53■■■□□ 2
NME3-202ENST00000561637 ZC3H14Q6PJT7 736 aaKnown RBP27.53■■■□□ 2
NME3-202ENST00000561637 MAP4K3Q8IVH8 894 aa27.53■■■□□ 2
NME3-202ENST00000561637 MAML2Q8IZL2 1156 aaPredicted RBP27.53■■■□□ 2
NME3-202ENST00000561637 SUMF1Q8NBK3 374 aa27.53■■■□□ 2
NME3-202ENST00000561637 SNX21Q969T3 373 aa27.53■■■□□ 2
NME3-202ENST00000561637 DNAJC19Q96DA6 116 aa27.53■■■□□ 2
NME3-202ENST00000561637 MSTO1Q9BUK6 570 aa27.53■■■□□ 2
NME3-202ENST00000561637 TBC1D7Q9P0N9 293 aa27.53■■■□□ 2
NME3-202ENST00000561637 TFIP11Q9UBB9 837 aaKnown RBP27.53■■■□□ 2
NME3-202ENST00000561637 STK17AQ9UEE5 414 aa27.53■■■□□ 2
NME3-202ENST00000561637 NUB1Q9Y5A7 615 aa27.53■■■□□ 2
NME3-202ENST00000561637 NOTCH4Q99466 2003 aa27.53■■■□□ 2
NME3-202ENST00000561637 A0A0B4J269 797 aa27.52■■■□□ 2
NME3-202ENST00000561637 ANHXE9PGG2 379 aa27.52■■■□□ 2
NME3-202ENST00000561637 OGTO15294 1046 aa27.52■■■□□ 2
NME3-202ENST00000561637 TRAPPC3O43617 180 aa27.52■■■□□ 2
NME3-202ENST00000561637 RPL9P32969 192 aaKnown RBP27.52■■■□□ 2
NME3-202ENST00000561637 MCM4P33991 863 aa27.52■■■□□ 2
NME3-202ENST00000561637 ARPP19P56211 112 aa27.52■■■□□ 2
NME3-202ENST00000561637 ROR1Q01973 937 aa27.52■■■□□ 2
NME3-202ENST00000561637 ZBTB6Q15916 424 aa27.52■■■□□ 2
NME3-202ENST00000561637 ANKS3Q6ZW76 656 aa27.52■■■□□ 2
NME3-202ENST00000561637 DDX12PQ92771 950 aa27.52■■■□□ 2
NME3-202ENST00000561637 RPP25Q9BUL9 199 aaKnown RBP27.52■■■□□ 2
NME3-202ENST00000561637 FGFBP2Q9BYJ0 223 aa27.52■■■□□ 2
NME3-202ENST00000561637 DAXXQ9UER7 740 aaPredicted RBP27.52■■■□□ 2
NME3-202ENST00000561637 CCDC39Q9UFE4 941 aa27.52■■■□□ 2
NME3-202ENST00000561637 POLIQ9UNA4 740 aa27.52■■■□□ 2
NME3-202ENST00000561637 TBC1D4O60343 1298 aa27.51■■□□□ 1.99
NME3-202ENST00000561637 NASPP49321 788 aaPredicted RBP27.51■■□□□ 1.99
NME3-202ENST00000561637 KCNA1Q09470 495 aa27.51■■□□□ 1.99
NME3-202ENST00000561637 FOXD4L6Q3SYB3 417 aaPredicted RBP27.51■■□□□ 1.99
NME3-202ENST00000561637 FOXD4L3Q6VB84 417 aaPredicted RBP27.51■■□□□ 1.99
NME3-202ENST00000561637 KRI1Q8N9T8 703 aaKnown RBP27.51■■□□□ 1.99
NME3-202ENST00000561637 PJA1Q8NG27 643 aa27.51■■□□□ 1.99
NME3-202ENST00000561637 SUSD3Q96L08 255 aa27.51■■□□□ 1.99
NME3-202ENST00000561637 SLC2A4RGQ9NR83 387 aa27.51■■□□□ 1.99
NME3-202ENST00000561637 NUMBLQ9Y6R0 609 aa27.51■■□□□ 1.99
NME3-202ENST00000561637 WDR27A2RRH5 827 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 KRT37O76014 449 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 FSHRP23945 695 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 PPP2R3AQ06190 1150 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 MRPL58Q14197 206 aaKnown RBP27.5■■□□□ 1.99
NME3-202ENST00000561637 RSPO4Q2I0M5 234 aaPredicted RBP27.5■■□□□ 1.99
NME3-202ENST00000561637 PDILTQ8N807 584 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 ITFG1Q8TB96 612 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 FAM212AQ96EL1 285 aa27.5■■□□□ 1.99
NME3-202ENST00000561637 ZSCAN16Q9H4T2 348 aaPredicted RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms