RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MST1LQ2TV78 715 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 NRN1LQ496H8 165 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 GAGE13Q4V321 117 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 USP39Q53GS9 565 aaKnown RBP4.66□□□□□ -1.66
HERC1-215ENST00000561436 IGFL4Q6B9Z1 124 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 GADL1Q6ZQY3 521 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 POLNQ7Z5Q5 900 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 SGMS1Q86VZ5 419 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 PRR18Q8N4B5 295 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 MB21D1Q8N884 522 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 ZBTB34Q8NCN2 500 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.66□□□□□ -1.66
HERC1-215ENST00000561436 RGMAQ96B86 450 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 PGBD4Q96DM1 585 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 CDK5RAP3Q96JB5 506 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 CDC5LQ99459 802 aaKnown RBP4.66□□□□□ -1.66
HERC1-215ENST00000561436 SENP6Q9GZR1 1112 aaPredicted RBP4.66□□□□□ -1.66
HERC1-215ENST00000561436 SLC6A15Q9H2J7 730 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 ARNT2Q9HBZ2 717 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 IL23AQ9NPF7 189 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 LANCL2Q9NS86 450 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 RRP7BPQ9NSQ0 103 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 TMEM140Q9NV12 185 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 LIMCH1Q9UPQ0 1083 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 IPPQ9Y573 584 aa4.66□□□□□ -1.66
HERC1-215ENST00000561436 TIAM1Q13009 1591 aa4.65□□□□□ -1.66
HERC1-215ENST00000561436 MAST1Q9Y2H9 1570 aa4.65□□□□□ -1.66
HERC1-215ENST00000561436 CLTCQ00610 1675 aaKnown RBP4.65□□□□□ -1.66
HERC1-215ENST00000561436 TEX33O43247 280 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 FTLP02792 175 aaPredicted RBP4.65□□□□□ -1.67
HERC1-215ENST00000561436 VSIG10L2P0DP72 767 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 HIBADHP31937 336 aaKnown RBP4.65□□□□□ -1.67
HERC1-215ENST00000561436 RPS19P39019 145 aaKnown RBP4.65□□□□□ -1.67
HERC1-215ENST00000561436 CASRP41180 1078 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 KIR2DL3P43628 341 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 PTTG1IPP53801 180 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 CDC42EP1Q00587 391 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 PPP3CAQ08209 521 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 PICALMQ13492 652 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 GRM3Q14832 879 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 RAB39AQ14964 217 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 PRKD1Q15139 912 aaPredicted RBP4.65□□□□□ -1.67
HERC1-215ENST00000561436 C3orf36Q3SXR2 165 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 HS1BP3Q53T59 392 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 B3GNT9Q6UX72 402 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 MAMDC4Q6UXC1 1216 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 Q6ZRM9 215 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 BRINP3Q76B58 766 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 C11orf96Q7Z7L8 435 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 DAAM2Q86T65 1068 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 ELOA2Q8IYF1 753 aaPredicted RBP4.65□□□□□ -1.67
HERC1-215ENST00000561436 Q8N1X5 172 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 PQLC1Q8N2U9 271 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 OR7D4Q8NG98 312 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 RABGGTAQ92696 567 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 DPF2Q92785 391 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 FAM167AQ96KS9 214 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 MSL2Q9HCI7 577 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 TRPC5Q9UL62 973 aaPredicted RBP4.65□□□□□ -1.67
HERC1-215ENST00000561436 EFCAB6Q5THR3 1501 aa4.65□□□□□ -1.67
HERC1-215ENST00000561436 ABCC5O15440 1437 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 TET3O43151 1660 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 IQGAP1P46940 1657 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 C1SP09871 688 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 TRIM27P14373 513 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 IL2RBP14784 551 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 PHKG2P15735 406 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 SMARCA1P28370 1054 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 CACNB3P54284 484 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 FAM193AP78312 1265 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 ABHD15Q6UXT9 468 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 DBX2Q6ZNG2 339 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 CCDC149Q6ZUS6 474 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 C3orf20Q8ND61 904 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 IL17DQ8TAD2 202 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 KAT5Q92993 513 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 PSMD1Q99460 953 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 ACO2Q99798 780 aaKnown RBP4.64□□□□□ -1.67
HERC1-215ENST00000561436 ZNF747Q9BV97 191 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 SARGQ9BW04 601 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 SCAND2PQ9GZW5 306 aaPredicted RBP4.64□□□□□ -1.67
HERC1-215ENST00000561436 TMEM60Q9H2L4 133 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 CNNM1Q9NRU3 951 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 MOCS1Q9NZB8 636 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 GPRC5DQ9NZD1 345 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 MYRFQ9Y2G1 1151 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 STXBP5LQ9Y2K9 1186 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 PCDHA13Q9Y5I0 950 aa4.64□□□□□ -1.67
HERC1-215ENST00000561436 EIF2AK4Q9P2K8 1649 aaKnown RBP4.64□□□□□ -1.67
HERC1-215ENST00000561436 ZFYVE9O95405 1425 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 VPS8Q8N3P4 1428 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 C1QTNF3-AMACRE9PGA6 284 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 GPR32O75388 356 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 UBXN7O94888 489 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 MAP4K4O95819 1239 aaPredicted RBP4.63□□□□□ -1.67
HERC1-215ENST00000561436 ZBED1O96006 694 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 C6P13671 934 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 EDNRBP24530 442 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 HTR1BP28222 390 aa4.63□□□□□ -1.67
HERC1-215ENST00000561436 PTPN7P35236 360 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms