RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 JAM3Q9BX67 310 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 MRPL4Q9BYD3 311 aaKnown RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 AS3MTQ9HBK9 375 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 RXFP1Q9HBX9 757 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 HYPKQ9NX55 129 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 SLC5A4Q9NY91 659 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 BTBD7Q9P203 1132 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 PPARGC1AQ9UBK2 798 aaKnown RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 FBLN5Q9UBX5 448 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 CD207Q9UJ71 328 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 FBXL7Q9UJT9 491 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 MYRFQ9Y2G1 1151 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 NPFFR2Q9Y5X5 522 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 GCN1Q92616 2671 aaKnown RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 DMDP11532 3685 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 KIF16BQ96L93 1317 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 SYNRGQ9UMZ2 1314 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 MAST4O15021 2626 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 ASH1LQ9NR48 2969 aaKnown RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 LINC01553A4QN01 128 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 NUDT19A8MXV4 375 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 OVOL3O00110 214 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 HRKO00198 91 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 TAF4O00268 1085 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 LINC01565O15544 149 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 OPA1O60313 960 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 ENTPD3O75355 529 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 CSPG5O95196 566 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 SOD2P04179 222 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 NTRK1P04629 796 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 CYP2C9P11712 490 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 AKR1A1P14550 325 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 SDSP20132 328 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 ICAM3P32942 547 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 PAK1Q13153 545 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 GPM6BQ13491 265 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 PICALMQ13492 652 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 PTPN21Q16825 1174 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 KIZQ2M2Z5 673 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 FNDC3BQ53EP0 1204 aaKnown RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 PLEKHG4Q58EX7 1191 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 TAF7LQ5H9L4 462 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 CNNM4Q6P4Q7 775 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 RSPO2Q6UXX9 243 aaPredicted RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 UBE3BQ7Z3V4 1068 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 KIAA0907Q7Z7F0 614 aaPredicted RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 NLRX1Q86UT6 975 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 CABP7Q86V35 215 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 PCSK9Q8NBP7 692 aaKnown RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.87□□□□□ -1.79
SPG11-225ENST00000561391 RIN2Q8WYP3 895 aaPredicted RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 RAD9AQ99638 391 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 ZFYVE21Q9BQ24 234 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 OSBPL5Q9H0X9 879 aaPredicted RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 INCENPQ9NQS7 918 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 CNNM1Q9NRU3 951 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 DBR1Q9UK59 544 aaKnown RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 ACSL6Q9UKU0 697 aa3.87□□□□□ -1.79
SPG11-225ENST00000561391 COA3Q9Y2R0 106 aaPredicted RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 LAS1LQ9Y4W2 734 aaKnown RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 TNPO3Q9Y5L0 923 aaKnown RBP3.87□□□□□ -1.79
SPG11-225ENST00000561391 PRR5-ARHGAP8B1AHC4 643 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 C19orf81C9J6K1 198 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 K7ESM1 405 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 NCK2O43639 380 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 AKAP8O43823 692 aaKnown RBP3.86□□□□□ -1.79
SPG11-225ENST00000561391 B4GALT4O60513 344 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 CSF1RP07333 972 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 PFKMP08237 780 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 COL6A2P12110 1019 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 PNLIPP16233 465 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 SP100P23497 879 aaPredicted RBP3.86□□□□□ -1.79
SPG11-225ENST00000561391 GRK2P25098 689 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 VIPR1P32241 457 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 GRK3P35626 688 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 DNM2P50570 870 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 CLCN5P51795 746 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 NEK4P51957 841 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 RRP1P56182 461 aaKnown RBP3.86□□□□□ -1.79
SPG11-225ENST00000561391 CORO7P57737 925 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 ARHGAP8P85298 464 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 BEX3Q00994 111 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 HYAL1Q12794 435 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 ITGA7Q13683 1181 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 PLS1Q14651 629 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 RTP5Q14D33 572 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 TESK1Q15569 626 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 TRIM61Q5EBN2 209 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 N4BP2L1Q5TBK1 243 aaPredicted RBP3.86□□□□□ -1.79
SPG11-225ENST00000561391 CXCL17Q6UXB2 119 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 LDHAL6AQ6ZMR3 332 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 GSTCDQ8NEC7 633 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 PLEKHO2Q8TD55 490 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 NINJ1Q92982 152 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 PWWP2AQ96N64 755 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 MOV10L1Q9BXT6 1211 aaKnown RBP3.86□□□□□ -1.79
SPG11-225ENST00000561391 SMOC2Q9H3U7 446 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 WDR26Q9H7D7 661 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 IPPKQ9H8X2 491 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 TRIM39Q9HCM9 518 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms