RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 POU5F1Q01860 360 aaKnown RBP15.07■□□□□ 0
TPM1-230ENST00000561266 KCNB1Q14721 858 aa15.07■□□□□ 0
TPM1-230ENST00000561266 C9orf57Q5W0N0 161 aa15.07■□□□□ 0
TPM1-230ENST00000561266 KIAA1841Q6NSI8 718 aa15.07■□□□□ 0
TPM1-230ENST00000561266 PALB2Q86YC2 1186 aa15.07■□□□□ 0
TPM1-230ENST00000561266 CD302Q8IX05 232 aa15.07■□□□□ 0
TPM1-230ENST00000561266 SMRP1Q8NCR6 262 aa15.07■□□□□ 0
TPM1-230ENST00000561266 OR5B17Q8NGF7 314 aa15.07■□□□□ 0
TPM1-230ENST00000561266 SPATA20Q8TB22 786 aa15.07■□□□□ 0
TPM1-230ENST00000561266 PIK3R5Q8WYR1 880 aa15.07■□□□□ 0
TPM1-230ENST00000561266 SUSD3Q96L08 255 aa15.07■□□□□ 0
TPM1-230ENST00000561266 TIGD1Q96MW7 591 aa15.07■□□□□ 0
TPM1-230ENST00000561266 DMAC2Q9NW81 257 aa15.07■□□□□ 0
TPM1-230ENST00000561266 DPP3Q9NY33 737 aa15.07■□□□□ 0
TPM1-230ENST00000561266 DERAQ9Y315 318 aa15.07■□□□□ 0
TPM1-230ENST00000561266 TIMM13Q9Y5L4 95 aaPredicted RBP15.07■□□□□ 0
TPM1-230ENST00000561266 NCOR1O75376 2440 aa15.06■□□□□ 0
TPM1-230ENST00000561266 TULP1O00294 542 aaPredicted RBP15.06■□□□□ 0
TPM1-230ENST00000561266 TBC1D4O60343 1298 aa15.06■□□□□ 0
TPM1-230ENST00000561266 PRPF40AO75400 957 aaKnown RBP15.06■□□□□ 0
TPM1-230ENST00000561266 LDHAP00338 332 aaKnown RBP15.06■□□□□ 0
TPM1-230ENST00000561266 AARSP49588 968 aaKnown RBP eCLIP15.06■□□□□ 0
TPM1-230ENST00000561266 CASP4P49662 377 aa15.06■□□□□ 0
TPM1-230ENST00000561266 MRPL58Q14197 206 aaKnown RBP15.06■□□□□ 0
TPM1-230ENST00000561266 PSMD5Q16401 504 aa15.06■□□□□ 0
TPM1-230ENST00000561266 ISM2Q6H9L7 571 aa15.06■□□□□ 0
TPM1-230ENST00000561266 LILRA6Q6PI73 481 aa15.06■□□□□ 0
TPM1-230ENST00000561266 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.06■□□□□ 0
TPM1-230ENST00000561266 C12orf56Q8IXR9 622 aa15.06■□□□□ 0
TPM1-230ENST00000561266 C1orf127Q8N9H9 656 aa15.06■□□□□ 0
TPM1-230ENST00000561266 ADAMTS19Q8TE59 1207 aa15.06■□□□□ 0
TPM1-230ENST00000561266 BORCS6Q96GS4 357 aa15.06■□□□□ 0
TPM1-230ENST00000561266 POP1Q99575 1024 aaKnown RBP15.06■□□□□ 0
TPM1-230ENST00000561266 EMILIN2Q9BXX0 1053 aa15.06■□□□□ 0
TPM1-230ENST00000561266 FNIP2Q9P278 1114 aa15.06■□□□□ 0
TPM1-230ENST00000561266 SIX4Q9UIU6 781 aa15.06■□□□□ 0
TPM1-230ENST00000561266 C2CD2Q9Y426 696 aa15.06■□□□□ 0
TPM1-230ENST00000561266 USP15Q9Y4E8 981 aaPredicted RBP15.06■□□□□ 0
TPM1-230ENST00000561266 M0QZQ0 153 aa15.05■□□□□ -0
TPM1-230ENST00000561266 TGM5O43548 720 aa15.05■□□□□ -0
TPM1-230ENST00000561266 IL18RAPO95256 599 aa15.05■□□□□ -0
TPM1-230ENST00000561266 BMP6P22004 513 aa15.05■□□□□ -0
TPM1-230ENST00000561266 MCM4P33991 863 aa15.05■□□□□ -0
TPM1-230ENST00000561266 LILRA4P59901 499 aa15.05■□□□□ -0
TPM1-230ENST00000561266 TFAMQ00059 246 aaKnown RBP15.05■□□□□ -0
TPM1-230ENST00000561266 BMS1Q14692 1282 aaKnown RBP15.05■□□□□ -0
TPM1-230ENST00000561266 VARS2Q5ST30 1063 aaKnown RBP15.05■□□□□ -0
TPM1-230ENST00000561266 CLEC17AQ6ZS10 378 aa15.05■□□□□ -0
TPM1-230ENST00000561266 BEST2Q8NFU1 509 aa15.05■□□□□ -0
TPM1-230ENST00000561266 SUSD6Q92537 303 aa15.05■□□□□ -0
TPM1-230ENST00000561266 ZNF516Q92618 1163 aa15.05■□□□□ -0
TPM1-230ENST00000561266 CASP10Q92851 521 aa15.05■□□□□ -0
TPM1-230ENST00000561266 TSPAN18Q96SJ8 248 aa15.05■□□□□ -0
TPM1-230ENST00000561266 MTRRQ9UBK8 725 aa15.05■□□□□ -0
TPM1-230ENST00000561266 STK39Q9UEW8 545 aa15.05■□□□□ -0
TPM1-230ENST00000561266 NUB1Q9Y5A7 615 aa15.05■□□□□ -0
TPM1-230ENST00000561266 NOTCH4Q99466 2003 aa15.05■□□□□ -0
TPM1-230ENST00000561266 MUC3AQ02505 3323 aa15.05■□□□□ -0
TPM1-230ENST00000561266 ZNF233A6NK53 670 aa15.04■□□□□ -0
TPM1-230ENST00000561266 CD44P16070 742 aaKnown RBP15.04■□□□□ -0
TPM1-230ENST00000561266 OR1D2P34982 312 aa15.04■□□□□ -0
TPM1-230ENST00000561266 PRCPP42785 496 aa15.04■□□□□ -0
TPM1-230ENST00000561266 CYP24A1Q07973 514 aa15.04■□□□□ -0
TPM1-230ENST00000561266 ELAVL2Q12926 359 aaKnown RBP15.04■□□□□ -0
TPM1-230ENST00000561266 SMAD4Q13485 552 aaKnown RBP15.04■□□□□ -0
TPM1-230ENST00000561266 SNRNP35Q16560 246 aaKnown RBP15.04■□□□□ -0
TPM1-230ENST00000561266 AAK1Q2M2I8 961 aa15.04■□□□□ -0
TPM1-230ENST00000561266 RARS2Q5T160 578 aaKnown RBP15.04■□□□□ -0
TPM1-230ENST00000561266 GPR65Q8IYL9 337 aa15.04■□□□□ -0
TPM1-230ENST00000561266 XXYLT1Q8NBI6 393 aa15.04■□□□□ -0
TPM1-230ENST00000561266 MFSD14AQ96MC6 490 aa15.04■□□□□ -0
TPM1-230ENST00000561266 MTMR12Q9C0I1 747 aa15.04■□□□□ -0
TPM1-230ENST00000561266 MAN1B1Q9UKM7 699 aa15.04■□□□□ -0
TPM1-230ENST00000561266 PCDHB8Q9UN66 801 aa15.04■□□□□ -0
TPM1-230ENST00000561266 SSX2IPQ9Y2D8 614 aa15.04■□□□□ -0
TPM1-230ENST00000561266 DENND4AQ7Z401 1863 aa15.03■□□□□ -0
TPM1-230ENST00000561266 PDXKO00764 312 aa15.03■□□□□ -0
TPM1-230ENST00000561266 KIAA0391O15091 583 aaKnown RBP15.03■□□□□ -0
TPM1-230ENST00000561266 RFPL2O75678 378 aa15.03■□□□□ -0
TPM1-230ENST00000561266 NR3C1P04150 777 aa15.03■□□□□ -0
TPM1-230ENST00000561266 ITGB3P05106 788 aa15.03■□□□□ -0
TPM1-230ENST00000561266 ADH1AP07327 375 aa15.03■□□□□ -0
TPM1-230ENST00000561266 POLR2BP30876 1174 aaKnown RBP15.03■□□□□ -0
TPM1-230ENST00000561266 PMS1P54277 932 aaKnown RBP15.03■□□□□ -0
TPM1-230ENST00000561266 UBE2HP62256 183 aa15.03■□□□□ -0
TPM1-230ENST00000561266 SNRPFP62306 86 aaKnown RBP15.03■□□□□ -0
TPM1-230ENST00000561266 PSMD6Q15008 389 aa15.03■□□□□ -0
TPM1-230ENST00000561266 SMAD2Q15796 467 aaKnown RBP15.03■□□□□ -0
TPM1-230ENST00000561266 ZCWPW2Q504Y3 356 aa15.03■□□□□ -0
TPM1-230ENST00000561266 C1orf220Q5T0J3 134 aa15.03■□□□□ -0
TPM1-230ENST00000561266 HS2ST1Q7LGA3 356 aa15.03■□□□□ -0
TPM1-230ENST00000561266 ELOA2Q8IYF1 753 aaPredicted RBP15.03■□□□□ -0
TPM1-230ENST00000561266 GUF1Q8N442 669 aaKnown RBP15.03■□□□□ -0
TPM1-230ENST00000561266 KHSRPQ92945 711 aaKnown RBP eCLIP15.03■□□□□ -0
TPM1-230ENST00000561266 SENP8Q96LD8 212 aa15.03■□□□□ -0
TPM1-230ENST00000561266 TMEM209Q96SK2 561 aa15.03■□□□□ -0
TPM1-230ENST00000561266 MAN1C1Q9NR34 630 aa15.03■□□□□ -0
TPM1-230ENST00000561266 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.03■□□□□ -0
TPM1-230ENST00000561266 LMBRD1Q9NUN5 540 aa15.03■□□□□ -0
TPM1-230ENST00000561266 INTS13Q9NVM9 706 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms