RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 SPTLC1O15269 473 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 KINO60870 393 aaKnown RBP18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 LDHAP00338 332 aaKnown RBP18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 AARSP49588 968 aaKnown RBP eCLIP18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 CLCN4P51793 760 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 ELAVL2Q12926 359 aaKnown RBP18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 BMS1Q14692 1282 aaKnown RBP18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 C9orf57Q5W0N0 161 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 RSPO2Q6UXX9 243 aaPredicted RBP18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 GPR65Q8IYL9 337 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 BEST2Q8NFU1 509 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 CXorf38Q8TB03 319 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 PLEKHO2Q8TD55 490 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 SUSD3Q96L08 255 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 TSPAN18Q96SJ8 248 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 DMAC2Q9NW81 257 aa18.52■□□□□ 0.55
KNSTRN-213ENST00000561169 TRIOO75962 3097 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 PIRO00625 290 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 KIAA0391O15091 583 aaKnown RBP18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 IL9P15248 144 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 MCM4P33991 863 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 SNRPFP62306 86 aaKnown RBP18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 PSMD5Q16401 504 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 SNRNP35Q16560 246 aaKnown RBP18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 TJAP1Q5JTD0 557 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 PTCRAQ6ISU1 281 aaPredicted RBP18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 ANKRD54Q6NXT1 300 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 C1orf127Q8N9H9 656 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 XXYLT1Q8NBI6 393 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 RDH13Q8NBN7 331 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 SMRP1Q8NCR6 262 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 OR5B17Q8NGF7 314 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 CCDC47Q96A33 483 aaKnown RBP18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 NECAB3Q96P71 396 aaPredicted RBP18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 CLSTN3Q9BQT9 956 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 APOL5Q9BWW9 433 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 EMILIN2Q9BXX0 1053 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 DPP3Q9NY33 737 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 CD207Q9UJ71 328 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 NUB1Q9Y5A7 615 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 NOTCH4Q99466 2003 aa18.51■□□□□ 0.55
KNSTRN-213ENST00000561169 ZNF233A6NK53 670 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 TULP1O00294 542 aaPredicted RBP18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 XPOTO43592 962 aaKnown RBP18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 NR3C1P04150 777 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 KLRC2P26717 231 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 CASP4P49662 377 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 TFAMQ00059 246 aaKnown RBP18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 CYP24A1Q07973 514 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 AAK1Q2M2I8 961 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 ZCWPW2Q504Y3 356 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 GUF1Q8N442 669 aaKnown RBP18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 C12orf76Q8N812 135 aaPredicted RBP18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 GSDMAQ96QA5 445 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 MTMR12Q9C0I1 747 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 FNIP2Q9P278 1114 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 SIX4Q9UIU6 781 aa18.5■□□□□ 0.55
KNSTRN-213ENST00000561169 PDXKO00764 312 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 MBTPS2O43462 519 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 ADH1AP07327 375 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 SPATA31D3P0C874 917 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 BMP6P22004 513 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 LILRA4P59901 499 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 VARS2Q5ST30 1063 aaKnown RBP18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 SPATA31D4Q6ZUB0 917 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 PALB2Q86YC2 1186 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 SLC9A9Q8IVB4 645 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 ELOA2Q8IYF1 753 aaPredicted RBP18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 CASP10Q92851 521 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 SMARCE1Q969G3 411 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 CCDC34Q96HJ3 373 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 POP1Q99575 1024 aaKnown RBP18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 S1PR5Q9H228 398 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 CGNQ9P2M7 1197 aaKnown RBP18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 MTRRQ9UBK8 725 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 MAN1B1Q9UKM7 699 aa18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 TIMM13Q9Y5L4 95 aaPredicted RBP18.49■□□□□ 0.55
KNSTRN-213ENST00000561169 FSD2A1L4K1 749 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 M0QZQ0 153 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 TRAPPC3O43617 180 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 TBC1D4O60343 1298 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 PRCPP42785 496 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 SMAD4Q13485 552 aaKnown RBP18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 MRPL58Q14197 206 aaKnown RBP18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 PSMD6Q15008 389 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 ISM2Q6H9L7 571 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 LILRA6Q6PI73 481 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 NT5DC4Q86YG4 428 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 GOLGA5Q8TBA6 731 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 KIAA1586Q9HCI6 787 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 LMBRD1Q9NUN5 540 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 INTS13Q9NVM9 706 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 PCDHB8Q9UN66 801 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 TRAF3IP3Q9Y228 551 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 SSX2IPQ9Y2D8 614 aa18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 USP15Q9Y4E8 981 aaPredicted RBP18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.48■□□□□ 0.55
KNSTRN-213ENST00000561169 SYN3O14994 580 aa18.47■□□□□ 0.55
KNSTRN-213ENST00000561169 TGM5O43548 720 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms