RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 DCLK2Q8N568 766 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 SYT2Q8N9I0 419 aaPredicted RBP14.62□□□□□ -0.07
PSME1-208ENST00000561059 SPIRE2Q8WWL2 714 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 DDX12PQ92771 950 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 SHDQ96IW2 340 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 CDK5RAP3Q96JB5 506 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 SUSD3Q96L08 255 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 ZSWIM3Q96MP5 696 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 PGLYRP2Q96PD5 576 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 HINFPQ9BQA5 517 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 HEBP1Q9NRV9 189 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 GPR179Q6PRD1 2367 aa14.62□□□□□ -0.07
PSME1-208ENST00000561059 H7C4K7 107 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 PPEF2O14830 753 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 SYN3O14994 580 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 CLDN3O15551 220 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 MYL4P12829 197 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 CPB1P15086 417 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 ATF2P15336 505 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 FCARP24071 287 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 RPL9P32969 192 aaKnown RBP14.61□□□□□ -0.07
PSME1-208ENST00000561059 SMTNP53814 917 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 TWF1Q12792 350 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 TMEM119Q4V9L6 283 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 RILPL1Q5EBL4 403 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 FAM78AQ5JUQ0 283 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 PRSS36Q5K4E3 855 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 HYIQ5T013 277 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 GPBP1Q86WP2 473 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 KIAA2013Q8IYS2 634 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 KIF12Q96FN5 646 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 NTPCRQ9BSD7 190 aaKnown RBP14.61□□□□□ -0.07
PSME1-208ENST00000561059 DDX23Q9BUQ8 820 aaKnown RBP14.61□□□□□ -0.07
PSME1-208ENST00000561059 C17orf75Q9HAS0 396 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 LTB4R2Q9NPC1 389 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 CEP72Q9P209 647 aa14.61□□□□□ -0.07
PSME1-208ENST00000561059 ECI2O75521 394 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 VIPR2P41587 438 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 PFKPQ01813 784 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 PRKCQQ04759 706 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 CSTF1Q05048 431 aaKnown RBP14.6□□□□□ -0.07
PSME1-208ENST00000561059 GRIN1Q05586 938 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 MCL1Q07820 350 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 RABEP1Q15276 862 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 ZNF280DQ6N043 979 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 TSSK4Q6SA08 328 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 PDZD4Q76G19 769 aaPredicted RBP14.6□□□□□ -0.07
PSME1-208ENST00000561059 TCEAL8Q8IYN2 117 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 FAM212AQ96EL1 285 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 REEP2Q9BRK0 252 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 BCO2Q9BYV7 579 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 ZHX3Q9H4I2 956 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 GDE1Q9NZC3 331 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 NDRG2Q9UN36 371 aaKnown RBP14.6□□□□□ -0.07
PSME1-208ENST00000561059 PCDHB8Q9UN66 801 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 NCANO14594 1321 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 CACNA1IQ9P0X4 2223 aa14.6□□□□□ -0.07
PSME1-208ENST00000561059 SHISA7A6NL88 538 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 LACTBL1A8MY62 500 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 LAMTOR5O43504 91 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 MOSPD3O75425 235 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 VNN2O95498 520 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 MARCKSP29966 332 aaPredicted RBP14.59□□□□□ -0.07
PSME1-208ENST00000561059 ID4P47928 161 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 LIG4P49917 911 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 NCKAP1LP55160 1127 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 ENOX2Q16206 610 aaKnown RBP14.59□□□□□ -0.07
PSME1-208ENST00000561059 ZPBP2Q6X784 338 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 HAUS6Q7Z4H7 955 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 APPL2Q8NEU8 664 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 TIPINQ9BVW5 301 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 CRISPLD1Q9H336 500 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 AFF4Q9UHB7 1163 aaKnown RBP14.59□□□□□ -0.07
PSME1-208ENST00000561059 KIF3AQ9Y496 699 aa14.59□□□□□ -0.07
PSME1-208ENST00000561059 TTC26A0AVF1 554 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 TISP43B9A030 160 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 K7ENM7 598 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 HNRNPDLO14979 420 aaKnown RBP14.58□□□□□ -0.08
PSME1-208ENST00000561059 SOAT2O75908 522 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 CLTAP09496 248 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 YWHAHQ04917 246 aaPredicted RBP14.58□□□□□ -0.08
PSME1-208ENST00000561059 MCM6Q14566 821 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 TEAD2Q15562 447 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 CYP4A22Q5TCH4 519 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 TPGS2Q68CL5 300 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 IQCEQ6IPM2 695 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 VITQ6UXI7 678 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 RTL10Q7L3V2 364 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 ELMOD1Q8N336 334 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 MYCT1Q8N699 235 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 TTC9BQ8N6N2 239 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 ELSPBP1Q96BH3 223 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 ZNF512Q96ME7 567 aaPredicted RBP14.58□□□□□ -0.08
PSME1-208ENST00000561059 TMEM209Q96SK2 561 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 IKZF4Q9H2S9 585 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 SLITRK6Q9H5Y7 841 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 BRD9Q9H8M2 597 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 ZFP14Q9HCL3 533 aa14.58□□□□□ -0.08
PSME1-208ENST00000561059 AVENQ9NQS1 362 aaPredicted RBP14.58□□□□□ -0.08
PSME1-208ENST00000561059 TBX20Q9UMR3 447 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms