RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PTPRFP10586 1907 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 GPR179Q6PRD1 2367 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 USP24Q9UPU5 2620 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 LINC01553A4QN01 128 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 SMAD7O15105 426 aaKnown RBP4.62□□□□□ -1.67
HERC1-211ENST00000560983 MATN3O15232 486 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 CPP00450 1065 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 FCER1AP12319 257 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 ZNF20P17024 532 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 ZEB1P37275 1124 aaPredicted RBP4.62□□□□□ -1.67
HERC1-211ENST00000560983 ITGA7Q13683 1181 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 COG2Q14746 738 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 GPNMBQ14956 572 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 CLUL1Q15846 466 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 TNNI3KQ59H18 835 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 BEND3Q5T5X7 828 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 CPZQ66K79 652 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 MCTP2Q6DN12 878 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 PKN3Q6P5Z2 889 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 CXCL17Q6UXB2 119 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 CEP68Q76N32 757 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 MILR1Q7Z6M3 343 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 FOXP4Q8IVH2 680 aaPredicted RBP4.62□□□□□ -1.67
HERC1-211ENST00000560983 ACER1Q8TDN7 264 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 DNAAF4Q8WXU2 420 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 YTHDC1Q96MU7 727 aaKnown RBP4.62□□□□□ -1.67
HERC1-211ENST00000560983 RAD9AQ99638 391 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 KIAA1683Q9H0B3 1180 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 TMPRSS5Q9H3S3 457 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 RPAP3Q9H6T3 665 aaPredicted RBP4.62□□□□□ -1.67
HERC1-211ENST00000560983 CLDND1Q9NY35 253 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 HOXC10Q9NYD6 342 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 ACTR10Q9NZ32 417 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 DTLQ9NZJ0 730 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 TNKSO95271 1327 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 SPEF2Q9C093 1822 aa4.62□□□□□ -1.67
HERC1-211ENST00000560983 LAMA5O15230 3695 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 TCRBV5S2A0A599 114 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 CYSRT1A8MQ03 144 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 B2RBV5 119 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 MEFVO15553 781 aaPredicted RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 B4GALT3O60512 393 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 GJB5O95377 273 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 EYA4O95677 639 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 GH2P01242 217 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 IFIT1P09914 478 aaKnown RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 IQCF3P0C7M6 154 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 ARP10275 920 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 CYP2C9P11712 490 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 ACTN1P12814 892 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 STAT5AP42229 794 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 ATXN1P54253 815 aaKnown RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 WDR5P61964 334 aaKnown RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 DEFB103AP81534 67 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 BEX3Q00994 111 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 PUM3Q15397 648 aaKnown RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 SF1Q15637 639 aaKnown RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 MAMDC4Q6UXC1 1216 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 EP400NLQ6ZTU2 488 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 RPAINQ86UA6 219 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 KLHDC4Q8TBB5 520 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 LPIN2Q92539 896 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 TRMT2BQ96GJ1 504 aaKnown RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 TMEM169Q96HH4 297 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 GPR20Q99678 358 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 C17orf80Q9BSJ5 609 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 CCSER2Q9H7U1 834 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 TRMT13Q9NUP7 481 aaKnown RBP4.61□□□□□ -1.67
HERC1-211ENST00000560983 CTNNA3Q9UI47 895 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 WASF3Q9UPY6 502 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 CNPY2Q9Y2B0 182 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 DLG5Q8TDM6 1919 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 ASTN1O14525 1302 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 CLSPNQ9HAW4 1339 aa4.61□□□□□ -1.67
HERC1-211ENST00000560983 ZZEF1O43149 2961 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 EP300Q09472 2414 aaPredicted RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 H3BNC9 293 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 GRM8O00222 908 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 HGSO14964 777 aaPredicted RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 NCK2O43639 380 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 TBX10O75333 385 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 CABYRO75952 493 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 BAIAP3O94812 1187 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 MAP4K4O95819 1239 aaPredicted RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 LMNAP02545 664 aaKnown RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 LRG1P02750 347 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 SNRPB2P08579 225 aaKnown RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 LCP1P13796 627 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 PTGS1P23219 599 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 ICAM3P32942 547 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 RFC2P35250 354 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 USP14P54578 494 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 PSMC6P62333 389 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 MECOMQ03112 1051 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 HYAL1Q12794 435 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 LSAMPQ13449 338 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 ACVR2BQ13705 512 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 TMEM132BQ14DG7 1078 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 PTPROQ16827 1216 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 PRSS53Q2L4Q9 553 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms