RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 PEX3P56589 373 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 GPC5P78333 572 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 ZNF638Q14966 1978 aaKnown RBP11.73□□□□□ -0.53
TPM1-227ENST00000560970 UBXN2BQ14CS0 331 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 UPP1Q16831 310 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 UVSSAQ2YD98 709 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 ZNF568Q3ZCX4 644 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 RSPO2Q6UXX9 243 aaPredicted RBP11.73□□□□□ -0.53
TPM1-227ENST00000560970 TAS1R3Q7RTX0 852 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 C3orf58Q8NDZ4 430 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 ING5Q8WYH8 240 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 REEP2Q9BRK0 252 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 RPP25Q9BUL9 199 aaKnown RBP11.73□□□□□ -0.53
TPM1-227ENST00000560970 GOLGA2P5Q9HBQ8 144 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 TOPORSQ9NS56 1045 aaPredicted RBP11.73□□□□□ -0.53
TPM1-227ENST00000560970 BACE2Q9Y5Z0 518 aa11.73□□□□□ -0.53
TPM1-227ENST00000560970 RALGAPA1Q6GYQ0 2036 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 KINO60870 393 aaKnown RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 CUTAO60888 179 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 LRRN2O75325 713 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 GRM5P41594 1212 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 YARSP54577 528 aaKnown RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 ROR1Q01973 937 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 SNW1Q13573 536 aaKnown RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 E2F4Q16254 413 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 ZNF528Q3MIS6 628 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 ATL3Q6DD88 541 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 TPRG1Q6ZUI0 275 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 LEO1Q8WVC0 666 aaPredicted RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 RUBCNQ92622 972 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 TIPINQ9BVW5 301 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 CCDC94Q9BW85 323 aaPredicted RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 OSBPL6Q9BZF3 934 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 CDT1Q9H211 546 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 LTB4R2Q9NPC1 389 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 SLC38A7Q9NVC3 462 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 SPATA6Q9NWH7 488 aaPredicted RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 ARHGAP28Q9P2N2 729 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 DNMT3BQ9UBC3 853 aaKnown RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 FBXO4Q9UKT5 387 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 PCDHA7Q9UN72 937 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 MRPS23Q9Y3D9 190 aaKnown RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 HELZP42694 1942 aaKnown RBP11.72□□□□□ -0.53
TPM1-227ENST00000560970 MYO16Q9Y6X6 1858 aa11.72□□□□□ -0.53
TPM1-227ENST00000560970 GREB1Q4ZG55 1949 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 ARHGEF37A1IGU5 675 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 I3L4J1 428 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 SLC16A4O15374 487 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 LAMTOR5O43504 91 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 ECI2O75521 394 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 LRG1P02750 347 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 RHOP08100 348 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 PLS3P13797 630 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 CEBPBP17676 345 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 TXLNAP40222 546 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 DMP1Q13316 513 aaPredicted RBP11.71□□□□□ -0.53
TPM1-227ENST00000560970 SLC5A9Q2M3M2 681 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 NT5DC1Q5TFE4 455 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 RRAGBQ5VZM2 374 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 SLC8B1Q6J4K2 584 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 KIAA2013Q8IYS2 634 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 MAML2Q8IZL2 1156 aaPredicted RBP11.71□□□□□ -0.53
TPM1-227ENST00000560970 PDILTQ8N807 584 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 CEP120Q8N960 986 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 DNASE1L2Q92874 299 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 RMDN1Q96DB5 314 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 FIZ1Q96SL8 496 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 MRPL4Q9BYD3 311 aaKnown RBP11.71□□□□□ -0.53
TPM1-227ENST00000560970 PANK2Q9BZ23 570 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 AVENQ9NQS1 362 aaPredicted RBP11.71□□□□□ -0.53
TPM1-227ENST00000560970 GDE1Q9NZC3 331 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 KCND2Q9NZV8 630 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 RCOR1Q9UKL0 485 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
TPM1-227ENST00000560970 WDR27A2RRH5 827 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 MYMKA6NI61 221 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 CCDC169A6NNP5 214 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 PODXLO00592 558 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 PRRG1O14668 218 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 SYN3O14994 580 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 TARSP26639 723 aaKnown RBP11.7□□□□□ -0.54
TPM1-227ENST00000560970 STAT6P42226 847 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 BRCC3P46736 316 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 ME1P48163 572 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 ZNF131P52739 623 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 KRT85P78386 507 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 SOX4Q06945 474 aaPredicted RBP11.7□□□□□ -0.54
TPM1-227ENST00000560970 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 XKR4Q5GH76 650 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
TPM1-227ENST00000560970 RESP18Q5W5W9 173 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 CD300LGQ6UXG3 332 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 DGLUCYQ7Z3D6 616 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 TMEM161BQ8NDZ6 487 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 KMT5AQ9NQR1 393 aa11.7□□□□□ -0.54
TPM1-227ENST00000560970 PRMT8Q9NR22 394 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms