RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 INPPL1O15357 1258 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 SLC16A3O15427 465 aaKnown RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 B4GALT5O43286 388 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CALUO43852 315 aaPredicted RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 NBNO60934 754 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 TIMP1P01033 207 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 NR3C1P04150 777 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CLTBP09497 229 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 MCF2P10911 925 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CD33P20138 364 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 SFPQP23246 707 aaKnown RBP eCLIP5.97□□□□□ -1.454e-8■■■□□ 16.5
ZEB1-220ENST00000560909 RPL13P26373 211 aaKnown RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 RFC2P35250 354 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CHMP4BP1P59074 171 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CLDN10P78369 228 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 MYL5Q02045 173 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 STRN3Q13033 797 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 PRPF4BQ13523 1007 aaKnown RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 HSP90AA2PQ14568 343 aaPredicted RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 KYAT1Q16773 422 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 UVSSAQ2YD98 709 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 PLEKHG4Q58EX7 1191 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 XKR4Q5GH76 650 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 UBXN11Q5T124 520 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 ZNF468Q5VIY5 522 aaPredicted RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 EEF1DP3Q658K8 133 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 MPZL3Q6UWV2 235 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CRELD2Q6UXH1 353 aaPredicted RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 LRRC8DQ7L1W4 858 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 HS2ST1Q7LGA3 356 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 MRPL10Q7Z7H8 261 aaKnown RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 RTN4RL1Q86UN2 441 aaPredicted RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 NELFCDQ8IXH7 590 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 ZNF592Q92610 1267 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 TRIM43Q96BQ3 446 aaPredicted RBP5.97□□□□□ -1.45
ZEB1-220ENST00000560909 MFSD14AQ96MC6 490 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 OSMRQ99650 979 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CBWD1Q9BRT8 395 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 WNT8AQ9H1J5 351 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 RBSNQ9H1K0 784 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 IKZF4Q9H2S9 585 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 TMX1Q9H3N1 280 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 PDZD7Q9H5P4 517 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 KIAA1586Q9HCI6 787 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 ST3GAL5Q9UNP4 418 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 NOD1Q9Y239 953 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 NFE2L3Q9Y4A8 694 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 CEP290O15078 2479 aa5.97□□□□□ -1.45
ZEB1-220ENST00000560909 A0A0U1RQF3 1178 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 TRIM49BA6NDI0 452 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 TISP43B9A030 160 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 M0QZ92 97 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 HNRNPDLO14979 420 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 N4BP3O15049 544 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CETN3O15182 167 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 OGTO15294 1046 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CLDN3O15551 220 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 MEFVO15553 781 aaPredicted RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 EXTL3O43909 919 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 PQBP1O60828 265 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CSDE1O75534 798 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 RPS6KA5O75582 802 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 AKAP3O75969 853 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 FGFR1OPO95684 399 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 GNA14O95837 355 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 ITGB8P26012 769 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 EEF1GP26641 437 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 TMEM62Q0P6H9 643 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 ADAM9Q13443 819 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 DCAF4L1Q3SXM0 396 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 ATF7IP2Q5U623 682 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 KLHL10Q6JEL2 608 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 NOTUMQ6P988 496 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 SLC27A1Q6PCB7 646 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 FIGNL1Q6PIW4 674 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 SARM1Q6SZW1 724 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 ALKAL1Q6UXT8 129 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CATSPER4Q7RTX7 472 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 FRMD5Q7Z6J6 570 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 TRIM59Q8IWR1 403 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CSGALNACT2Q8N6G5 542 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 XXYLT1Q8NBI6 393 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 ZNF668Q96K58 619 aaPredicted RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 ZBTB45Q96K62 511 aaPredicted RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 TSPAN18Q96SJ8 248 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 TSG101Q99816 390 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 SRRTQ9BXP5 876 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CDT1Q9H211 546 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 HIPK3Q9H422 1215 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 RGS18Q9NS28 235 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 SAMSN1Q9NSI8 373 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 FANCLQ9NW38 375 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 HSPBP1Q9NZL4 362 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 LIMA1Q9UHB6 759 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CPSF3Q9UKF6 684 aaKnown RBP5.96□□□□□ -1.46
ZEB1-220ENST00000560909 HCN2Q9UL51 889 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 PADI3Q9ULW8 664 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 CTNND2Q9UQB3 1225 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 USP20Q9Y2K6 914 aa5.96□□□□□ -1.46
ZEB1-220ENST00000560909 PCDHGC4Q9Y5F7 938 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms