RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SEPT1Q8WYJ6 367 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 EAF2Q96CJ1 260 aaPredicted RBP7.32□□□□□ -1.24
HERC1-208ENST00000560462 INPP4AQ96PE3 977 aaPredicted RBP7.32□□□□□ -1.24
HERC1-208ENST00000560462 FAM129BQ96TA1 746 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 TPSD1Q9BZJ3 242 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 CAPN10Q9HC96 672 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 METTL5Q9NRN9 209 aaKnown RBP7.32□□□□□ -1.24
HERC1-208ENST00000560462 STIM2Q9P246 746 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 PILRBQ9UKJ0 227 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
HERC1-208ENST00000560462 MRPL11Q9Y3B7 192 aaKnown RBP7.32□□□□□ -1.24
HERC1-208ENST00000560462 GOLGA4Q13439 2230 aaKnown RBP7.32□□□□□ -1.24
HERC1-208ENST00000560462 MTORP42345 2549 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 ABCA7Q8IZY2 2146 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 ATP9AO75110 1047 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 GJB3O75712 270 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 RHOP08100 348 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 SYPP08247 313 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 GNAI3P08754 354 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 KLRC1P26715 233 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 VIPR2P41587 438 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 EIF1AXP47813 144 aaKnown RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 DHX9Q08211 1270 aaKnown RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 CDC37Q16543 378 aaPredicted RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 LONRF3Q496Y0 759 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 PEAR1Q5VY43 1037 aaPredicted RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 LYSMD4Q5XG99 296 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 RABEPKQ7Z6M1 372 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 WDR63Q8IWG1 891 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 SRRM1Q8IYB3 904 aaKnown RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 RNF168Q8IYW5 571 aaPredicted RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 GIMAP8Q8ND71 665 aaPredicted RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 TTC8Q8TAM2 541 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 SMARCD2Q92925 531 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 LPPQ93052 612 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 FAM193BQ96PV7 902 aaPredicted RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 SENP7Q9BQF6 1050 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 TMEM175Q9BSA9 504 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.31□□□□□ -1.24
HERC1-208ENST00000560462 TSPAN10Q9H1Z9 355 aaPredicted RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 OSBPL3Q9H4L5 887 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 PRDM16Q9HAZ2 1276 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 IL17RBQ9NRM6 502 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 CHST7Q9NS84 486 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 DACT1Q9NYF0 836 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 PRG3Q9Y2Y8 225 aaPredicted RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 SPG11Q96JI7 2443 aa7.31□□□□□ -1.24
HERC1-208ENST00000560462 MTCL1Q9Y4B5 1905 aaKnown RBP7.31□□□□□ -1.24
HERC1-208ENST00000560462 CACNA1DQ01668 2161 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 THADAQ6YHU6 1953 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 GSTTP1A0A1W2PQM5 241 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 TSPY2A6NKD2 308 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 GSG1L2A8MUP6 293 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 CHADO15335 359 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 FZD6O60353 706 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 STAM2O75886 525 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 DDHD2O94830 711 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 ITPKAP23677 461 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 TDO2P48775 406 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 DAB2P98082 770 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 EHHADHQ08426 723 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 GRSF1Q12849 480 aaKnown RBP eCLIP7.3□□□□□ -1.24
HERC1-208ENST00000560462 UVSSAQ2YD98 709 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 AXDND1Q5T1B0 1012 aaPredicted RBP7.3□□□□□ -1.24
HERC1-208ENST00000560462 VASH1Q7L8A9 365 aaPredicted RBP7.3□□□□□ -1.24
HERC1-208ENST00000560462 SYT13Q7L8C5 426 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 TMPRSS12Q86WS5 348 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 GPR65Q8IYL9 337 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 DAGLBQ8NCG7 672 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 URGCPQ8TCY9 931 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 SNRNP27Q8WVK2 155 aaKnown RBP7.3□□□□□ -1.24
HERC1-208ENST00000560462 B3GALT6Q96L58 329 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 TMEM209Q96SK2 561 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 CDC6Q99741 560 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 C2orf49Q9BVC5 232 aaPredicted RBP7.3□□□□□ -1.24
HERC1-208ENST00000560462 MRS2Q9HD23 443 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 STARD5Q9NSY2 213 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 MARCH5Q9NX47 278 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 PARP2Q9UGN5 583 aa7.3□□□□□ -1.24
HERC1-208ENST00000560462 ICE1Q9Y2F5 2266 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 GPR32O75388 356 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 OFD1O75665 1012 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 EFEMP2O95967 443 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 SLC3A2P08195 630 aaKnown RBP7.29□□□□□ -1.24
HERC1-208ENST00000560462 PDHBP11177 359 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 CDK11BP21127 795 aaKnown RBP7.29□□□□□ -1.24
HERC1-208ENST00000560462 HOXA13P31271 388 aaPredicted RBP7.29□□□□□ -1.24
HERC1-208ENST00000560462 ACTN2P35609 894 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 PHKA2P46019 1235 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 WNT7BP56706 349 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 RAB15P59190 212 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 ZNF543Q08ER8 600 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 RAD51AP2Q09MP3 1159 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 DMC1Q14565 340 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 RTP5Q14D33 572 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 UBE3CQ15386 1083 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 CCDC157Q569K6 752 aa7.29□□□□□ -1.24
HERC1-208ENST00000560462 LMBRD2Q68DH5 695 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms