RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 ERAP1Q9NZ08 941 aa11.37□□□□□ -0.59
DCAF11-227ENST00000560046 TNFSF13BQ9Y275 285 aa11.37□□□□□ -0.59
DCAF11-227ENST00000560046 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
DCAF11-227ENST00000560046 DOCK3Q8IZD9 2030 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 CCDC66A2RUB6 948 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 POLR3GO15318 223 aaPredicted RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 B4GALT4O60513 344 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 SYF2O95926 243 aaKnown RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 FGGP02679 453 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 HOXC6P09630 235 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 SRGAP2CP0DJJ0 459 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 ITGA4P13612 1032 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 COMTP21964 271 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 CTNNA1P35221 906 aaKnown RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 TNFSF9P41273 254 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 MRPS25P82663 173 aaKnown RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 MBTD1Q05BQ5 628 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 CUL1Q13616 776 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 NCOA4Q13772 614 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 ATF7IP2Q5U623 682 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 ALS2CLQ60I27 953 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 EFCAB13Q8IY85 973 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 RBBP8NLQ8NC74 664 aaPredicted RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 CCDC26Q8TAB7 109 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 TRAPPC12Q8WVT3 735 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 FAXDC2Q96IV6 333 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 CFHR5Q9BXR6 569 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 PRO3102Q9H379 93 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 RNPEPQ9H4A4 650 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 ZCCHC17Q9NP64 241 aaKnown RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 PRMT7Q9NVM4 692 aaPredicted RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 PSD3Q9NYI0 1048 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 CNOT8Q9UFF9 292 aaKnown RBP11.36□□□□□ -0.59
DCAF11-227ENST00000560046 PCDHB4Q9Y5E5 795 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 PCDHA3Q9Y5H8 950 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
DCAF11-227ENST00000560046 UMODL1Q5DID0 1318 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 FAM187AA6NFU0 413 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 AGPSO00116 658 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 ATMINO43313 823 aaPredicted RBP11.35□□□□□ -0.59
DCAF11-227ENST00000560046 PHACTR2O75167 634 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 IL18RAPO95256 599 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 SNAI1O95863 264 aaPredicted RBP11.35□□□□□ -0.59
DCAF11-227ENST00000560046 HARSP12081 509 aaKnown RBP11.35□□□□□ -0.59
DCAF11-227ENST00000560046 INSRRP14616 1297 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 PHKA2P46019 1235 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 CLCN3P51790 818 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 NOMO3P69849 1222 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 IRF5Q13568 498 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 GRB14Q14449 540 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 MESDQ14696 234 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 AMHR2Q16671 573 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 DUOXA2Q1HG44 320 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 SEZ6Q53EL9 994 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 HSP90B2PQ58FF3 399 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 SPRYD7Q5W111 196 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 EEF1DP3Q658K8 133 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 MON1BQ7L1V2 547 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 MAATS1Q7Z4T9 603 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 ZBTB33Q86T24 672 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 PHF13Q86YI8 300 aaPredicted RBP11.35□□□□□ -0.59
DCAF11-227ENST00000560046 RHPN2Q8IUC4 686 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 TSEN2Q8NCE0 465 aaKnown RBP11.35□□□□□ -0.59
DCAF11-227ENST00000560046 KRT35Q92764 455 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 EXOC4Q96A65 974 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 SH3GL2Q99962 352 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 C16orf70Q9BSU1 422 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 TMEM106CQ9BVX2 250 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
DCAF11-227ENST00000560046 CDT1Q9H211 546 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 NFU1Q9UMS0 254 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
DCAF11-227ENST00000560046 PDCD11Q14690 1871 aaKnown RBP11.35□□□□□ -0.59
DCAF11-227ENST00000560046 GOLGA6L10A0A0M3HER8 536 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 A0A1W2PPC1 479 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 ZSCAN5CA6NGD5 496 aaPredicted RBP11.34□□□□□ -0.59
DCAF11-227ENST00000560046 SLC15A5A6NIM6 579 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 TMEM110-MUSTN1A8MSY1 372 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 PPFIA4O75335 1185 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 CST3P01034 146 aaPredicted RBP11.34□□□□□ -0.59
DCAF11-227ENST00000560046 CALCAP01258 141 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 MCF2P10911 925 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 ECHS1P30084 290 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 GNA15P30679 374 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 HSPA9P38646 679 aaKnown RBP11.34□□□□□ -0.59
DCAF11-227ENST00000560046 SLC1A1P43005 524 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 TM4SF4P48230 202 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 MARCKSL1P49006 195 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 TNFAIP2Q03169 654 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
DCAF11-227ENST00000560046 PTP4A2Q12974 167 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
DCAF11-227ENST00000560046 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 GPR142Q7Z601 462 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 PLEKHH3Q7Z736 793 aa11.34□□□□□ -0.59
DCAF11-227ENST00000560046 CD302Q8IX05 232 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms