RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 FBXL5Q9UKA1 691 aa22.26■■□□□ 1.15
CHRNA3-207ENST00000559941 PCDHB8Q9UN66 801 aa22.26■■□□□ 1.15
CHRNA3-207ENST00000559941 POLIQ9UNA4 740 aa22.26■■□□□ 1.15
CHRNA3-207ENST00000559941 CACNA1HO95180 2353 aa22.26■■□□□ 1.15
CHRNA3-207ENST00000559941 WDR27A2RRH5 827 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 ANHXE9PGG2 379 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 NUBP1P53384 320 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 PTPN5P54829 565 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 CD302Q8IX05 232 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 TMEM130Q8N3G9 435 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 HVCN1Q96D96 273 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 SEL1LQ9UBV2 794 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 STYXL1Q9Y6J8 313 aa22.25■■□□□ 1.15
CHRNA3-207ENST00000559941 ARHGEF37A1IGU5 675 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 M0QZQ0 153 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 NARSO43776 548 aaKnown RBP22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 ATF2P15336 505 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 GAP43P17677 238 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 ELF1P32519 619 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 TCF15Q12870 199 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 CTXN3Q4LDR2 81 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 SPATA1Q5VX52 437 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 SLFN12LQ6IEE8 588 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 ZNF280DQ6N043 979 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 LINC00301Q8NCQ3 95 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 STRA6Q9BX79 667 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 MFSD1Q9H3U5 465 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 DNMT3BQ9UBC3 853 aaKnown RBP22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 CDH7Q9ULB5 785 aa22.24■■□□□ 1.15
CHRNA3-207ENST00000559941 PPP1R37O75864 691 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 STAT6P42226 847 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 AARSP49588 968 aaKnown RBP eCLIP22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 ARPP19P56211 112 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 HTR4Q13639 388 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 STK38Q15208 465 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 TPGS2Q68CL5 300 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 ADALQ6DHV7 355 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 ASTLQ6HA08 431 aaPredicted RBP22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 FAM212AQ96EL1 285 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 PANK2Q9BZ23 570 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 HCFC1R1Q9NWW0 138 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 KCNH3Q9ULD8 1083 aa22.23■■□□□ 1.15
CHRNA3-207ENST00000559941 A0A087X0B3 334 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 TISP43B9A030 160 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 ACOT2P49753 483 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 CLCN5P51795 746 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 GUCY2FP51841 1108 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 PABPC1LQ4VXU2 614 aaKnown RBP22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 JADE1Q6IE81 842 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 TCEAL8Q8IYN2 117 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 TMEM105Q8N8V8 129 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 BEST2Q8NFU1 509 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 ITFG1Q8TB96 612 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 ZNF396Q96N95 335 aaPredicted RBP22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 ASB7Q9H672 318 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 MRPL44Q9H9J2 332 aaKnown RBP22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 WNT16Q9UBV4 365 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 FBXL21Q9UKT6 434 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 AGO2Q9UKV8 859 aaKnown RBP22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 DERAQ9Y315 318 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 SCN1AP35498 2009 aa22.22■■□□□ 1.15
CHRNA3-207ENST00000559941 PRRG1O14668 218 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 SPTLC2O15270 562 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 OAZ2O95190 189 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 LRG1P02750 347 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 SRFP11831 508 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 POU5F1Q01860 360 aaKnown RBP22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 FGF13Q92913 245 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 IKZF4Q9H2S9 585 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 CYP4F11Q9HBI6 524 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 AVENQ9NQS1 362 aaPredicted RBP22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 OLFML3Q9NRN5 406 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 AFF4Q9UHB7 1163 aaKnown RBP22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 MAFFQ9ULX9 164 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 NUMBLQ9Y6R0 609 aa22.21■■□□□ 1.15
CHRNA3-207ENST00000559941 FRMD3A2A2Y4 597 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 PPP6R2O75170 966 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 SEC24AO95486 1093 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 CFHP08603 1231 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 PDIA4P13667 645 aaKnown RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 NPR3P17342 541 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 PTPN2P17706 415 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 PAX3P23760 479 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 YWHAHQ04917 246 aaPredicted RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 POSTNQ15063 836 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 L1TD1Q5T7N2 865 aaKnown RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 CWF19L1Q69YN2 538 aaKnown RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 DSTYKQ6XUX3 929 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 ALYREFQ86V81 257 aaKnown RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 HSCBQ8IWL3 235 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 SIX5Q8N196 739 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 FLCNQ8NFG4 579 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 FGF14Q92915 247 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 ACCSQ96QU6 501 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 OXCT2Q9BYC2 517 aaPredicted RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 TBC1D7Q9P0N9 293 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 TFIP11Q9UBB9 837 aaKnown RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 EXOC7Q9UPT5 735 aa22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 TIMM13Q9Y5L4 95 aaPredicted RBP22.2■■□□□ 1.14
CHRNA3-207ENST00000559941 INSL5Q9Y5Q6 135 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms