RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TIMP1P01033 207 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 CYP3A5P20815 502 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 POLR2BP30876 1174 aaKnown RBP13.11□□□□□ -0.31
HERC1-205ENST00000559886 ATICP31939 592 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 RFC2P35250 354 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 STAT1P42224 750 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 RBP5P82980 135 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 ARHGAP44Q17R89 818 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 TCTN1Q2MV58 587 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 CYP26C1Q6V0L0 522 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 TMTC1Q8IUR5 882 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 KAT5Q92993 513 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
HERC1-205ENST00000559886 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 ZKSCAN5Q9Y2L8 839 aa13.11□□□□□ -0.31
HERC1-205ENST00000559886 SOX5P35711 763 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 ZNF699Q32M78 642 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 SHC3Q92529 594 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 CHP1Q99653 195 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 AGAP1Q9UPQ3 857 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 INPPL1O15357 1258 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 STAU1O95793 577 aaKnown RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 TBXAS1P24557 533 aaPredicted RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 ITGB8P26012 769 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 AFF1P51825 1210 aaKnown RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 SOX4Q06945 474 aaPredicted RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 CUL2Q13617 745 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 IRF2BP2Q7Z5L9 587 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 DEFB128Q7Z7B8 93 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 FAXDC2Q96IV6 333 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 SLC38A7Q9NVC3 462 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 MIOSQ9NXC5 875 aa13.1□□□□□ -0.31
HERC1-205ENST00000559886 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
HERC1-205ENST00000559886 THP07101 528 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
HERC1-205ENST00000559886 NAB2Q15742 525 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 ASIC2Q16515 512 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 C9orf57Q5W0N0 161 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 HGSNATQ68CP4 663 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 HPDLQ96IR7 371 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 ARID3AQ99856 593 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 NIF3L1Q9GZT8 377 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 TMEM161AQ9NX61 479 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 PYCARDQ9ULZ3 195 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 R3HCC1Q9Y3T6 440 aaKnown RBP13.09□□□□□ -0.31
HERC1-205ENST00000559886 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
HERC1-205ENST00000559886 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 PIRO00625 290 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 OFD1O75665 1012 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 SERPING1P05155 500 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 FERP16591 822 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 IBSPP21815 317 aaPredicted RBP13.08□□□□□ -0.31
HERC1-205ENST00000559886 PRKCIP41743 596 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 SCNN1GP51170 649 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 ZNF667Q5HYK9 610 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 FAM71AQ8IYT1 594 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 LRRC52Q8N7C0 313 aa13.08□□□□□ -0.31
HERC1-205ENST00000559886 EVI5O60447 810 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 GFPT2O94808 682 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 RAG1P15918 1043 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 LRPAP1P30533 357 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 KCNJ6P48051 423 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 ARID5AQ03989 594 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 WDR72Q3MJ13 1102 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 CRIPAKQ8N1N5 446 aa13.08□□□□□ -0.32
HERC1-205ENST00000559886 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.32
HERC1-205ENST00000559886 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.07□□□□□ -0.32
HERC1-205ENST00000559886 PPEF2O14830 753 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 CLSTN1O94985 981 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 PLEKP08567 350 aaPredicted RBP13.07□□□□□ -0.32
HERC1-205ENST00000559886 ASPAP45381 313 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 MYO1EQ12965 1108 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 MFSD5Q6N075 450 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 GLB1LQ6UWU2 654 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 RAD9BQ6WBX8 426 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 GPIHBP1Q8IV16 184 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
HERC1-205ENST00000559886 GOLGA2P5Q9HBQ8 144 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 CCDC172P0C7W6 258 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 ACO1P21399 889 aaKnown RBP13.07□□□□□ -0.32
HERC1-205ENST00000559886 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 GRIK3Q13003 919 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
HERC1-205ENST00000559886 IKBKEQ14164 716 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms