RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 PRPF4BQ13523 1007 aaKnown RBP19.08■□□□□ 0.65
SNX1-208ENST00000559844 WDR44Q5JSH3 913 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 RSPH3Q86UC2 560 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 RHOT2Q8IXI1 618 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 SLC20A1Q8WUM9 679 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 ZNF668Q96K58 619 aaPredicted RBP19.08■□□□□ 0.65
SNX1-208ENST00000559844 SELENOOQ9BVL4 669 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 ISCUQ9H1K1 167 aa19.08■□□□□ 0.65
SNX1-208ENST00000559844 TMCO5BA8MYB1 307 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 RTN2O75298 545 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 GZMAP12544 262 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 THPOP40225 353 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 FAAP100Q0VG06 881 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 TFDP1Q14186 410 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 TCEAL1Q15170 157 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 ZACNQ401N2 412 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 BEND6Q5SZJ8 279 aaPredicted RBP19.08■□□□□ 0.64
SNX1-208ENST00000559844 CRELD2Q6UXH1 353 aaPredicted RBP19.08■□□□□ 0.64
SNX1-208ENST00000559844 PEX26Q7Z412 305 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 DNAAF5Q86Y56 855 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 SLC35G2Q8TBE7 412 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 EPS8L1Q8TE68 723 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 NLRP4Q96MN2 994 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 CCDC113Q9H0I3 377 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 ANKFY1Q9P2R3 1169 aa19.08■□□□□ 0.64
SNX1-208ENST00000559844 NOCTQ9UK39 431 aaKnown RBP19.08■□□□□ 0.64
SNX1-208ENST00000559844 CYP26A1O43174 497 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 C4BPAP04003 597 aaKnown RBP19.07■□□□□ 0.64
SNX1-208ENST00000559844 ACOT2P49753 483 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 PDE6CP51160 858 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 GLE1Q53GS7 698 aaKnown RBP19.07■□□□□ 0.64
SNX1-208ENST00000559844 NME8Q8N427 588 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 ZNF516Q92618 1163 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 ZBTB45Q96K62 511 aaPredicted RBP19.07■□□□□ 0.64
SNX1-208ENST00000559844 SCLT1Q96NL6 688 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 CGRRF1Q99675 332 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 HAPLN2Q9GZV7 340 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 ABCB6Q9NP58 842 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 GINS2Q9Y248 185 aa19.07■□□□□ 0.64
SNX1-208ENST00000559844 CLDN3O15551 220 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 CTSHP09668 335 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 SRGAP2CP0DJJ0 459 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 AP3M2P53677 418 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 HADHBP55084 474 aaKnown RBP19.06■□□□□ 0.64
SNX1-208ENST00000559844 MAPK6Q16659 721 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 TRIM71Q2Q1W2 868 aaKnown RBP19.06■□□□□ 0.64
SNX1-208ENST00000559844 HDXQ7Z353 690 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 DAAM2Q86T65 1068 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 NOP9Q86U38 636 aaKnown RBP19.06■□□□□ 0.64
SNX1-208ENST00000559844 UBE2Q2Q8WVN8 375 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 FUT8Q9BYC5 575 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 STXBP5LQ9Y2K9 1186 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 ASAP2O43150 1006 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 TOM1L1O75674 476 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 RPLP2P05387 115 aaKnown RBP19.06■□□□□ 0.64
SNX1-208ENST00000559844 CLTBP09497 229 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 ABCB4P21439 1286 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 PIK3CAP42336 1068 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 MRPS6P82932 125 aaKnown RBP19.06■□□□□ 0.64
SNX1-208ENST00000559844 KIZQ2M2Z5 673 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 RPAINQ86UA6 219 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 RNF149Q8NC42 400 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 NLRP7Q8WX94 980 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 TATDN2Q93075 761 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 THAP2Q9H0W7 228 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 PDE11AQ9HCR9 933 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
SNX1-208ENST00000559844 TAS2R14Q9NYV8 317 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 AMFRQ9UKV5 643 aa19.06■□□□□ 0.64
SNX1-208ENST00000559844 PACSIN2Q9UNF0 486 aaPredicted RBP19.06■□□□□ 0.64
SNX1-208ENST00000559844 TANC1Q9C0D5 1861 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 M0QZ92 97 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 KCNK3O14649 394 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 HLA-DRAP01903 254 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 FTLP02792 175 aaPredicted RBP19.05■□□□□ 0.64
SNX1-208ENST00000559844 PRKCBP05771 671 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 CYP11B1P15538 503 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 CHRNB2P17787 502 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 GPC5P78333 572 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 CDR2Q01850 454 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 BIRC3Q13489 604 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 PALB2Q86YC2 1186 aa19.05■□□□□ 0.64
SNX1-208ENST00000559844 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.05■□□□□ 0.643e-11■■■■■ 99.4
SNX1-208ENST00000559844 A0A087WZ62 844 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 CKBP12277 381 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 DNA2P51530 1060 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 BPIFB4P59827 614 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 SURF1Q15526 300 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 TDRD10Q5VZ19 366 aaKnown RBP19.04■□□□□ 0.64
SNX1-208ENST00000559844 NT5DC3Q86UY8 548 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 SLC47A2Q86VL8 602 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 MS4A14Q96JA4 679 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 FDXACB1Q9BRP7 624 aaPredicted RBP19.04■□□□□ 0.64
SNX1-208ENST00000559844 TMEM39AQ9NV64 488 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 EHD2Q9NZN4 543 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 L1RE1Q9UN81 338 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 CDY2AQ9Y6F7 541 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 MAP2K7O14733 419 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 CAND2O75155 1236 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 GPR32O75388 356 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms