RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 CWC15Q9P013 229 aaKnown RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 DOCK3Q8IZD9 2030 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 TRPM7Q96QT4 1865 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 HMGB1P1B2RPK0 211 aaPredicted RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 MYO1FO00160 1098 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 EIF3HO15372 352 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPG11-217ENST00000559511 SRGAP2CP0DJJ0 459 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 NR1D1P20393 614 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 GNA15P30679 374 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 NSFP46459 744 aaKnown RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 RPL21P46778 160 aaKnown RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 GTF2A2P52657 109 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 LAMTOR4Q0VGL1 99 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 PDCLQ13371 301 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 MTMR3Q13615 1198 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 CCL15Q16663 113 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 DAB2IPQ5VWQ8 1189 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 CDCA2Q69YH5 1023 aaPredicted RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 ZPBP2Q6X784 338 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 BRSK2Q8IWQ3 736 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 DHX37Q8IY37 1157 aaKnown RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 GTF3C2Q8WUA4 911 aaPredicted RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 BRI3BPQ8WY22 251 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
SPG11-217ENST00000559511 CENPHQ9H3R5 247 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 RASAL2Q9UJF2 1139 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 ATP8A1Q9Y2Q0 1164 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 SLC45A1Q9Y2W3 748 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
SPG11-217ENST00000559511 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 NOP56O00567 594 aaKnown RBP11.79□□□□□ -0.52
SPG11-217ENST00000559511 PPFIA4O75335 1185 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 CST3P01034 146 aaPredicted RBP11.79□□□□□ -0.52
SPG11-217ENST00000559511 MYZAPP0CAP1 466 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 MYBL1P10243 752 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 TXNP10599 105 aaKnown RBP11.79□□□□□ -0.52
SPG11-217ENST00000559511 COILP38432 576 aaPredicted RBP11.79□□□□□ -0.52
SPG11-217ENST00000559511 KCNJ1P48048 391 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 EFNA5P52803 228 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 DRG2P55039 364 aaKnown RBP11.79□□□□□ -0.52
SPG11-217ENST00000559511 PLTPP55058 493 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 NOMO3P69849 1222 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 EMC10Q5UCC4 262 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 IER5Q5VY09 327 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 RNF149Q8NC42 400 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 RBBP8NLQ8NC74 664 aaPredicted RBP11.79□□□□□ -0.52
SPG11-217ENST00000559511 FBXO25Q8TCJ0 367 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 TRAPPC12Q8WVT3 735 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 FAM167AQ96KS9 214 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 SPATA33Q96N06 139 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 C11orf70Q9BRQ4 267 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 MRPL4Q9BYD3 311 aaKnown RBP11.79□□□□□ -0.52
SPG11-217ENST00000559511 EPB41L4BQ9H329 900 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 RABEP2Q9H5N1 569 aa11.79□□□□□ -0.52
SPG11-217ENST00000559511 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ASB14A6NK59 587 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ABLIM1O14639 778 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 TOM1L1O75674 476 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 GJB1P08034 283 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 TBXAS1P24557 533 aaPredicted RBP11.78□□□□□ -0.52
SPG11-217ENST00000559511 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ZNF792Q3KQV3 632 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ARMCX2Q7L311 632 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 EFCAB13Q8IY85 973 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 UBR7Q8N806 425 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 C12orf50Q8NA57 414 aaPredicted RBP11.78□□□□□ -0.52
SPG11-217ENST00000559511 ZBTB10Q96DT7 871 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 TRIM11Q96F44 468 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ACO2Q99798 780 aaKnown RBP11.78□□□□□ -0.52
SPG11-217ENST00000559511 HERPUD2Q9BSE4 406 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 TCHPQ9BT92 498 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 GBA2Q9HCG7 927 aaPredicted RBP11.78□□□□□ -0.52
SPG11-217ENST00000559511 MTUS1Q9ULD2 1270 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 PTPN22Q9Y2R2 807 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 IGKV6-21A0A0C4DH24 114 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 O00370 1275 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 PODXLO00592 558 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 PRKCBP05771 671 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ADORA2AP29274 412 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 FKBP1BP68106 108 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 CCNA1P78396 465 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 GUCY1A3Q02108 690 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 PTP4A2Q12974 167 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 SKIDA1Q1XH10 827 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ANKRD23Q86SG2 305 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 WDR49Q8IV35 697 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 CCDC105Q8IYK2 499 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 ZNF668Q96K58 619 aaPredicted RBP11.78□□□□□ -0.52
SPG11-217ENST00000559511 MORF4L1Q9UBU8 362 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 RSPH14Q9UHP6 348 aa11.78□□□□□ -0.52
SPG11-217ENST00000559511 LCMT1Q9UIC8 334 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms