RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 XXYLT1Q8NBI6 393 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 CXorf38Q8TB03 319 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 PIK3R5Q8WYR1 880 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 ASB2Q96Q27 587 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 MTMR12Q9C0I1 747 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 DMAC2Q9NW81 257 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 DPP3Q9NY33 737 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 NUB1Q9Y5A7 615 aa20.26■□□□□ 0.83
CASC4-209ENST00000559222 GRXCR2A6NFK2 248 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 ZNF233A6NK53 670 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 BIN1O00499 593 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 KIAA0391O15091 583 aaKnown RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 NR3C1P04150 777 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 BMP6P22004 513 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 PRCPP42785 496 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 CLCN4P51793 760 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 MRPS5P82675 430 aaKnown RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 POU5F1Q01860 360 aaKnown RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 CYP24A1Q07973 514 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 PSMD5Q16401 504 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 CAMK4Q16566 473 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 LEXMQ3ZCV2 418 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 ZCWPW2Q504Y3 356 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 SYCE2Q6PIF2 218 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 GUF1Q8N442 669 aaKnown RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 C12orf76Q8N812 135 aaPredicted RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 C1orf127Q8N9H9 656 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 ATXN2LQ8WWM7 1075 aaKnown RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 SUSD3Q96L08 255 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 GSDMAQ96QA5 445 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 POP1Q99575 1024 aaKnown RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 CLSTN3Q9BQT9 956 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 STK39Q9UEW8 545 aa20.25■□□□□ 0.83
CASC4-209ENST00000559222 TIMM13Q9Y5L4 95 aaPredicted RBP20.25■□□□□ 0.83
CASC4-209ENST00000559222 PIRO00625 290 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 PDXKO00764 312 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 XPOTO43592 962 aaKnown RBP20.24■□□□□ 0.83
CASC4-209ENST00000559222 SPATA31D3P0C874 917 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 IL9P15248 144 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 CD44P16070 742 aaKnown RBP20.24■□□□□ 0.83
CASC4-209ENST00000559222 KLRC2P26717 231 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 AARSP49588 968 aaKnown RBP eCLIP20.24■□□□□ 0.83
CASC4-209ENST00000559222 PMS1P54277 932 aaKnown RBP20.24■□□□□ 0.83
CASC4-209ENST00000559222 SNRPFP62306 86 aaKnown RBP20.24■□□□□ 0.83
CASC4-209ENST00000559222 BMS1Q14692 1282 aaKnown RBP20.24■□□□□ 0.83
CASC4-209ENST00000559222 ZNF658Q5TYW1 1059 aaPredicted RBP20.24■□□□□ 0.83
CASC4-209ENST00000559222 ANKRD54Q6NXT1 300 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 TMEM184AQ6ZMB5 413 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 SPATA31D4Q6ZUB0 917 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 PALB2Q86YC2 1186 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 ELOA2Q8IYF1 753 aaPredicted RBP20.24■□□□□ 0.83
CASC4-209ENST00000559222 CCDC34Q96HJ3 373 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 TSPAN18Q96SJ8 248 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 EMILIN2Q9BXX0 1053 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 SIX4Q9UIU6 781 aa20.24■□□□□ 0.83
CASC4-209ENST00000559222 NCK2O43639 380 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 EXOC3O60645 756 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 SMC2O95347 1197 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 ITGB3P05106 788 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 BMP1P13497 986 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 POLR2BP30876 1174 aaKnown RBP20.23■□□□□ 0.83
CASC4-209ENST00000559222 ELAVL2Q12926 359 aaKnown RBP20.23■□□□□ 0.83
CASC4-209ENST00000559222 VARS2Q5ST30 1063 aaKnown RBP20.23■□□□□ 0.83
CASC4-209ENST00000559222 CCDC127Q96BQ5 260 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 EEF2KMTQ96G04 330 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 NECAB3Q96P71 396 aaPredicted RBP20.23■□□□□ 0.83
CASC4-209ENST00000559222 INTS13Q9NVM9 706 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 RMND1Q9NWS8 449 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 CGNQ9P2M7 1197 aaKnown RBP20.23■□□□□ 0.83
CASC4-209ENST00000559222 MTRRQ9UBK8 725 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 CD207Q9UJ71 328 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 TRAF3IP3Q9Y228 551 aa20.23■□□□□ 0.83
CASC4-209ENST00000559222 TRIM49BA6NDI0 452 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 MBTPS2O43462 519 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 WEE2P0C1S8 567 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 DLATP10515 647 aaKnown RBP20.22■□□□□ 0.83
CASC4-209ENST00000559222 LILRA4P59901 499 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 PSMD6Q15008 389 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 PTCRAQ6ISU1 281 aaPredicted RBP20.22■□□□□ 0.83
CASC4-209ENST00000559222 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 SMRP1Q8NCR6 262 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 GOLGA5Q8TBA6 731 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 ZNF516Q92618 1163 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 BORCS6Q96GS4 357 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 COL25A1Q9BXS0 654 aaPredicted RBP20.22■□□□□ 0.83
CASC4-209ENST00000559222 S1PR5Q9H228 398 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 KIAA1586Q9HCI6 787 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 FNIP2Q9P278 1114 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 PCDHB8Q9UN66 801 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 DENND4AQ7Z401 1863 aa20.22■□□□□ 0.83
CASC4-209ENST00000559222 M0QZQ0 153 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 TGM5O43548 720 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 TRAPPC3O43617 180 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 ADH1AP07327 375 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 TMEM191BP0C7N4 346 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 DLG4P78352 724 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 CEP135Q66GS9 1140 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 NT5DC4Q86YG4 428 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 CASP10Q92851 521 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms