RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 PDZD7Q9H5P4 517 aa12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 AVENQ9NQS1 362 aaPredicted RBP12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 SEMA4GQ9NTN9 838 aa12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 GDE1Q9NZC3 331 aa12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 MTRRQ9UBK8 725 aa12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 NDRG2Q9UN36 371 aaKnown RBP12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 MRPS17Q9Y2R5 130 aaKnown RBP12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 MRPS23Q9Y3D9 190 aaKnown RBP12.3□□□□□ -0.44
CHRNA3-205ENST00000559080 DENND4CQ5VZ89 1909 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 MYH11P35749 1972 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 CCDC169A6NNP5 214 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 ACKR2O00590 384 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 HIP1RO75146 1068 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 CEBPBP17676 345 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 FGFR3P22607 806 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 NRLP54845 237 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 GAS6Q14393 721 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 PRSS36Q5K4E3 855 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 HYIQ5T013 277 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 PRR23CQ6ZRP0 262 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 KCTD17Q8N5Z5 321 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 RASSF8Q8NHQ8 419 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 CHAMP1Q96JM3 812 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 AK8Q96MA6 479 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 RUSC1Q9BVN2 902 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 RALYQ9UKM9 306 aaKnown RBP12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 CDY1Q9Y6F8 540 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 ANK1P16157 1881 aa12.29□□□□□ -0.44
CHRNA3-205ENST00000559080 NUP205Q92621 2012 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 K7ERI5 159 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 MAN2B1O00754 1011 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 HRO43593 1189 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 THP07101 528 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 CHRNB1P11230 501 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 UBA7P41226 1012 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 PEX3P56589 373 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 ELAVL2Q12926 359 aaKnown RBP12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 GRM2Q14416 872 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 CSRP2Q16527 193 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 ATF7IP2Q5U623 682 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 RINT1Q6NUQ1 792 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 KCNK18Q7Z418 384 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 MAP4K3Q8IVH8 894 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 PLIN2Q99541 437 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 IER2Q9BTL4 223 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 C17orf75Q9HAS0 396 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 LMAN1LQ9HAT1 526 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 POLD4Q9HCU8 107 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 ZNF334Q9HCZ1 680 aaPredicted RBP12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 KMT5AQ9NQR1 393 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 SNTG2Q9NY99 539 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 RAB23Q9ULC3 237 aa12.28□□□□□ -0.44
CHRNA3-205ENST00000559080 ZNF638Q14966 1978 aaKnown RBP12.27□□□□□ -0.44
CHRNA3-205ENST00000559080 ARHGEF37A1IGU5 675 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 TMEM189-UBE2V1I3L0A0 370 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 K7ELQ4 463 aaPredicted RBP12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 TM4SF5O14894 197 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 SLC26A4O43511 780 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 RECQL4O94761 1208 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 EDN1P05305 212 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 PTPN2P17706 415 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 GUCY2CP25092 1073 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 PMLP29590 882 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 CCR2P41597 374 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 NPTX2P47972 431 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 CCR3P51677 355 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 SATB1Q01826 763 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 DMWDQ09019 674 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 SRSF5Q13243 272 aaKnown RBP12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 ZNF568Q3ZCX4 644 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 TMEM119Q4V9L6 283 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 FAM78AQ5JUQ0 283 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 VITQ6UXI7 678 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 PRR23BQ6ZRT6 265 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 C1orf186Q6ZWK4 172 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 DAW1Q8N136 415 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 FAM3CQ92520 227 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 TCEAL4Q96EI5 215 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 INTS4Q96HW7 963 aaKnown RBP12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 PNMA5Q96PV4 448 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 BRD9Q9H8M2 597 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 ZFP14Q9HCL3 533 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 TRPV5Q9NQA5 729 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 KCND2Q9NZV8 630 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 USP20Q9Y2K6 914 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 BACE2Q9Y5Z0 518 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 NCANO14594 1321 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 MYO16Q9Y6X6 1858 aa12.27□□□□□ -0.45
CHRNA3-205ENST00000559080 ATRXP46100 2492 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms