RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 GOLGA6L3A6NEY3 463 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 NRP1O14786 923 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PPEF2O14830 753 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PMM2O15305 246 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TRAPPC3O43617 180 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 B4GALT3O60512 393 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TADA2AO75478 443 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 B3GAT3O94766 335 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 KIF4AO95239 1232 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 CA3P07451 260 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 GALTP07902 379 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 P4HA1P13674 534 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PAX3P23760 479 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 ATICP31939 592 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 CTNNB1P35222 781 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PBX3P40426 434 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TAF6P49848 677 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 UBASH3AP57075 661 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 MCCD1P59942 119 aaPredicted RBP7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 MYL6P60660 151 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TNNC1P63316 161 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 UBXN1Q04323 297 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 UPP1Q16831 310 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 EXOC3L4Q17RC7 722 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 SGSM1Q2NKQ1 1148 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 UVSSAQ2YD98 709 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 SV2CQ496J9 727 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 MIIPQ5JXC2 388 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PPP2R2DQ66LE6 453 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 DCLRE1AQ6PJP8 1040 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 KCNT2Q6UVM3 1135 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 DSTYKQ6XUX3 929 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 C15orf39Q6ZRI6 1047 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TMEM130Q8N3G9 435 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 LRRC52Q8N7C0 313 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 COLGALT1Q8NBJ5 622 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 HASPINQ8TF76 798 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 RABGGTAQ92696 567 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TAF4BQ92750 862 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TMEM169Q96HH4 297 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 HPDLQ96IR7 371 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PCMTD1Q96MG8 357 aaPredicted RBP7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 SAMD11Q96NU1 681 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PAAF1Q9BRP4 392 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 CRACR2AQ9BSW2 395 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PBX4Q9BYU1 374 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 PRO3102Q9H379 93 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 CWH43Q9H720 699 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 RAB20Q9NX57 234 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 IFNKQ9P0W0 207 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 CACNG4Q9UBN1 327 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 SIX4Q9UIU6 781 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 ADAM28Q9UKQ2 775 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 TRIOBPQ9H2D6 2365 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 LAMA2P24043 3122 aaKnown RBP7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 COL4A6Q14031 1691 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SF3B1O75533 1304 aaKnown RBP eCLIP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 A0A1B0GTH6 734 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 ARHGEF37A1IGU5 675 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 GTPBP10A4D1E9 387 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 LRRC10BA6NIK2 292 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 NT5C1B-RDH14C9J2C7 533 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 TMEM189-UBE2V1I3L0A0 370 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 PIRO00625 290 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 VNN1O95497 513 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 STAU1O95793 577 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 ASS1P00966 412 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 CST3P01034 146 aaPredicted RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 ODC1P11926 461 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 MYOGP15173 224 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 DNAJB2P25686 324 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 PBX2P40425 430 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 NOP14P78316 857 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SMAD3P84022 425 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 KRT17Q04695 432 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 LRMPQ12912 555 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 ELAVL2Q12926 359 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SYCP1Q15431 976 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 WDR72Q3MJ13 1102 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 EPC2Q52LR7 807 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF667Q5HYK9 610 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SCARA3Q6AZY7 606 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SCARA5Q6ZMJ2 495 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 APTXQ7Z2E3 356 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SLC39A11Q8N1S5 342 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 EHBP1Q8NDI1 1231 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 TIFAQ96CG3 184 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 IGSF21Q96ID5 467 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 NT5C1BQ96P26 610 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 TGS1Q96RS0 853 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 MMS19Q96T76 1030 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 PI4K2AQ9BTU6 479 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 LSM14BQ9BX40 385 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 TRIM5Q9C035 493 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 NIF3L1Q9GZT8 377 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 INTS2Q9H0H0 1204 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 NKX2-4Q9H2Z4 354 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SLC28A3Q9HAS3 691 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 RTN4Q9NQC3 1192 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms