RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 B3GALT6Q96L58 329 aa13.42□□□□□ -0.26
GABPB1-208ENST00000558970 TMEM175Q9BSA9 504 aa13.42□□□□□ -0.26
GABPB1-208ENST00000558970 MARCH5Q9NX47 278 aa13.42□□□□□ -0.26
GABPB1-208ENST00000558970 TAB2Q9NYJ8 693 aa13.42□□□□□ -0.26
GABPB1-208ENST00000558970 R3HCC1Q9Y3T6 440 aaKnown RBP13.42□□□□□ -0.26
GABPB1-208ENST00000558970 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
GABPB1-208ENST00000558970 TADA2AO75478 443 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 FGF18O76093 207 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 B3GAT3O94766 335 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 GNA14O95837 355 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 ATP1A3P13637 1013 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 CDK11BP21127 795 aaKnown RBP13.41□□□□□ -0.26
GABPB1-208ENST00000558970 BMPR1AP36894 532 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
GABPB1-208ENST00000558970 TRPC3Q13507 836 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 CBWD6Q4V339 395 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 CBWD3Q5JTY5 395 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 CBWD5Q5RIA9 395 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 C9orf57Q5W0N0 161 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 FOXR2Q6PJQ5 311 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 NT5DC4Q86YG4 428 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 TRIM59Q8IWR1 403 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 SLC39A11Q8N1S5 342 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 SLC35C1Q96A29 364 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 TMEM169Q96HH4 297 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 UROC1Q96N76 676 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 BPIFA3Q9BQP9 254 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 COLEC11Q9BWP8 271 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 ZNF576Q9H609 170 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 METTL14Q9HCE5 456 aaKnown RBP13.41□□□□□ -0.26
GABPB1-208ENST00000558970 SPG21Q9NZD8 308 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 SIX4Q9UIU6 781 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 ADAM28Q9UKQ2 775 aa13.41□□□□□ -0.26
GABPB1-208ENST00000558970 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.41□□□□□ -0.26
GABPB1-208ENST00000558970 SMTNL1A8MU46 457 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 C2CD2LO14523 706 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 LRRN2O75325 713 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 CYP3A5P20815 502 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 MXI1P50539 228 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 ZNF445P59923 1031 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 ERVK-21P61565 698 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 MYL7Q01449 175 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 GPM6BQ13491 265 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 IQCB1Q15051 598 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 TCP11X2Q5H9J9 407 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 ZNF697Q5TEC3 545 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 SV2AQ7L0J3 742 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 CEP57Q86XR8 500 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 FAM200AQ8TCP9 573 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 TAS1R2Q8TE23 839 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 RSPH1Q8WYR4 309 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 PI4K2AQ9BTU6 479 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 VPS16Q9H269 839 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
GABPB1-208ENST00000558970 ITGA11Q9UKX5 1188 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 RWDD3Q9Y3V2 267 aa13.4□□□□□ -0.26
GABPB1-208ENST00000558970 VCANP13611 3396 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 GOLGA6L19H0YKK7 550 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 IKBKBO14920 756 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 SPTLC1O15269 473 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 GRM6O15303 877 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 VNN1O95497 513 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 CST3P01034 146 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-208ENST00000558970 HLA-DRAP01903 254 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
GABPB1-208ENST00000558970 C4BPAP04003 597 aaKnown RBP13.39□□□□□ -0.27
GABPB1-208ENST00000558970 LRPAP1P30533 357 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
GABPB1-208ENST00000558970 PPM1AP35813 382 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 FMO5P49326 533 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 MYL6P60660 151 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 NCOA4Q13772 614 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 KRT31Q15323 416 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 CDKAL1Q5VV42 579 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 KRT39Q6A163 491 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 SPOPLQ6IQ16 392 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 FUT10Q6P4F1 479 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 SCARA5Q6ZMJ2 495 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 TAS1R1Q7RTX1 841 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 AUTS2Q8WXX7 1259 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 DDX27Q96GQ7 796 aaKnown RBP13.39□□□□□ -0.27
GABPB1-208ENST00000558970 ZNF560Q96MR9 790 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 TSPAN18Q96SJ8 248 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 TUBGCP2Q9BSJ2 902 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 C11orf84Q9BUA3 381 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-208ENST00000558970 VN1R3Q9BXE9 311 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 GPR62Q9BZJ7 368 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 HSD3B7Q9H2F3 369 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 PRDM12Q9H4Q4 367 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 TMEM8AQ9HCN3 771 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-208ENST00000558970 CDH23Q9H251 3354 aa13.39□□□□□ -0.27
GABPB1-208ENST00000558970 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 ANO9A1A5B4 782 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 PIRO00625 290 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms