RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ATICP31939 592 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 CASP14P31944 242 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 FXR1P51114 621 aaKnown RBP eCLIP19.45■□□□□ 0.7
CLPX-203ENST00000558958 POLR2FP61218 127 aaKnown RBP19.45■□□□□ 0.7
CLPX-203ENST00000558958 NOP14P78316 857 aaKnown RBP19.45■□□□□ 0.7
CLPX-203ENST00000558958 DEFB103AP81534 67 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 ZNF699Q32M78 642 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 TMEM240Q5SV17 173 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 SPOPLQ6IQ16 392 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 GJB7Q6PEY0 223 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 PSRC1Q6PGN9 363 aaPredicted RBP19.45■□□□□ 0.7
CLPX-203ENST00000558958 ARHGEF19Q8IW93 802 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 ABI1Q8IZP0 508 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 CCDC150Q8NCX0 1101 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 RSPH1Q8WYR4 309 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 TATDN2Q93075 761 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 ELMO3Q96BJ8 720 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 LBHD1Q9BQE6 289 aaPredicted RBP19.45■□□□□ 0.7
CLPX-203ENST00000558958 VRTNQ9H8Y1 702 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 APOBEC3GQ9HC16 384 aaKnown RBP19.45■□□□□ 0.7
CLPX-203ENST00000558958 R3HCC1Q9Y3T6 440 aaKnown RBP19.45■□□□□ 0.7
CLPX-203ENST00000558958 FHOD1Q9Y613 1164 aa19.45■□□□□ 0.7
CLPX-203ENST00000558958 GOLGA6L6A8MZA4 724 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 PPEF2O14830 753 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 UPP2O95045 317 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 STAU1O95793 577 aaKnown RBP19.44■□□□□ 0.7
CLPX-203ENST00000558958 TPM1P09493 284 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 RFX1P22670 979 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 GATMP50440 423 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 IQCEQ6IPM2 695 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 LRRC52Q8N7C0 313 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 HPDLQ96IR7 371 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.44■□□□□ 0.72e-7■□□□□ 8.6
CLPX-203ENST00000558958 UBE2TQ9NPD8 197 aaPredicted RBP19.44■□□□□ 0.7
CLPX-203ENST00000558958 NLRC4Q9NPP4 1024 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 TBC1D13Q9NVG8 400 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 DNAJC12Q9UKB3 198 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 AJAP1Q9UKB5 411 aaPredicted RBP19.44■□□□□ 0.7
CLPX-203ENST00000558958 LUC7L2Q9Y383 392 aaKnown RBP19.44■□□□□ 0.7
CLPX-203ENST00000558958 NUB1Q9Y5A7 615 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 NR2E3Q9Y5X4 410 aa19.44■□□□□ 0.7
CLPX-203ENST00000558958 DGKIO75912 1065 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 RPL9P32969 192 aaKnown RBP19.43■□□□□ 0.7
CLPX-203ENST00000558958 KCNJ6P48051 423 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 GCNT1Q02742 428 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 DSC1Q08554 894 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 TUSC3Q13454 348 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 RRAGAQ7L523 313 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 CACNA2D4Q7Z3S7 1137 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 PPM1KQ8N3J5 372 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 BAP1Q92560 729 aa19.43■□□□□ 0.7
CLPX-203ENST00000558958 AKR1B15C9JRZ8 316 aaPredicted RBP19.42■□□□□ 0.7
CLPX-203ENST00000558958 MFAP3LO75121 409 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 ADKP55263 362 aaKnown RBP19.42■□□□□ 0.7
CLPX-203ENST00000558958 ZBED6P86452 979 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 GOLGA8FQ08AF8 430 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 GOLGA8DPQ0D2H9 430 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 MYO1EQ12965 1108 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 CCDC186Q7Z3E2 898 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 ZNF280BQ86YH2 543 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 TC2NQ8N9U0 490 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 HERVK_113Q902F9 699 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 NIF3L1Q9GZT8 377 aa19.42■□□□□ 0.7
CLPX-203ENST00000558958 CASTOR2A6NHX0 329 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 TBKBP1A7MCY6 615 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 ZBBXA8MT70 800 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 PODXLO00592 558 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 DDHD2O94830 711 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 KRT9P35527 623 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 PNPLA4P41247 253 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 CLCNKBP51801 687 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 MFAP3P55082 362 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 GSDMDP57764 484 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 RNASELQ05823 741 aaKnown RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 UPP1Q16831 310 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 WDR72Q3MJ13 1102 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 ZNF667Q5HYK9 610 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 CNGA4Q8IV77 575 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 ZNF397Q8NF99 534 aaPredicted RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 KAT5Q92993 513 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 DDX27Q96GQ7 796 aaKnown RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 FAXDC2Q96IV6 333 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 FAM81BQ96LP2 452 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 ZNF560Q96MR9 790 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 KREMEN1Q96MU8 473 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 UROC1Q96N76 676 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 MRPL9Q9BYD2 267 aaKnown RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 STK33Q9BYT3 514 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 CACNG4Q9UBN1 327 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 TDRD15B5MCY1 1934 aaKnown RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 B4GALT3O60512 393 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 CLSTN1O94985 981 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 TBXAS1P24557 533 aaPredicted RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 JAM2P57087 298 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 CUL2Q13617 745 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 RAPGEF1Q13905 1077 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 ARID5BQ14865 1188 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 ENOSF1Q7L5Y1 443 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 TMCO2Q7Z6W1 182 aaPredicted RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 COLGALT2Q8IYK4 626 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms