RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PUF60Q9UHX1 559 aaKnown RBP18.84■□□□□ 0.61
TPM1-214ENST00000558544 ITGA11Q9UKX5 1188 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 LZTS1Q9Y250 596 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 NUB1Q9Y5A7 615 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 SF3B1O75533 1304 aaKnown RBP eCLIP18.84■□□□□ 0.619e-6■■■■■ 68.9
TPM1-214ENST00000558544 ANO9A1A5B4 782 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 I3L4J1 428 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 PIRO00625 290 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 FGFR1OPO95684 399 aaKnown RBP18.83■□□□□ 0.61
TPM1-214ENST00000558544 KRT19P08727 400 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 CCDC192P0DO97 292 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 CLDN10P78369 228 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 CAMK1Q14012 370 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 ADGRE1Q14246 886 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 ANO6Q4KMQ2 910 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 DCAF17Q5H9S7 520 aaPredicted RBP18.83■□□□□ 0.61
TPM1-214ENST00000558544 TRAPPC11Q7Z392 1133 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 VPS52Q8N1B4 723 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 GAS2L1Q99501 681 aaPredicted RBP18.83■□□□□ 0.61
TPM1-214ENST00000558544 CDX2Q99626 313 aaPredicted RBP18.83■□□□□ 0.61
TPM1-214ENST00000558544 FUCA2Q9BTY2 467 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 LMAN2LQ9H0V9 348 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 MMRN2Q9H8L6 949 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 TLR9Q9NR96 1032 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 ARMCX3Q9UH62 379 aaPredicted RBP18.83■□□□□ 0.61
TPM1-214ENST00000558544 SIX4Q9UIU6 781 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 AGAP1Q9UPQ3 857 aa18.83■□□□□ 0.61
TPM1-214ENST00000558544 PRRC2BQ5JSZ5 2229 aaKnown RBP18.83■□□□□ 0.61
TPM1-214ENST00000558544 EFEMP2O95967 443 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 SOD2P04179 222 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 IRS1P35568 1242 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 ERVFC1P60507 584 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 BIRC3Q13489 604 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 TCERG1LQ5VWI1 586 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 TDRD10Q5VZ19 366 aaKnown RBP18.82■□□□□ 0.6
TPM1-214ENST00000558544 TAS1R1Q7RTX1 841 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 FRMD5Q7Z6J6 570 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 RNF168Q8IYW5 571 aaPredicted RBP18.82■□□□□ 0.6
TPM1-214ENST00000558544 CXorf38Q8TB03 319 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 B3GALT6Q96L58 329 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 TCF25Q9BQ70 676 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 HERC2P3Q9BVR0 1158 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 ZBP1Q9H171 429 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 ENTPD7Q9NQZ7 604 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 MTMR10Q9NXD2 777 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 PCDHGC5Q9Y5F6 944 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 EYSQ5T1H1 3165 aa18.82■□□□□ 0.6
TPM1-214ENST00000558544 IGFBP4P22692 258 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 CA8P35219 290 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 GCLMP48507 274 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 AP3M2P53677 418 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 ENPEPQ07075 957 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 PPP3CAQ08209 521 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 PTPROQ16827 1216 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 FAM171A1Q5VUB5 890 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 PLPP4Q5VZY2 271 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 AUTS2Q8WXX7 1259 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 MRPL38Q96DV4 380 aaKnown RBP18.81■□□□□ 0.6
TPM1-214ENST00000558544 CNOT6LQ96LI5 555 aaKnown RBP18.81■□□□□ 0.6
TPM1-214ENST00000558544 ZNF560Q96MR9 790 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 METTL14Q9HCE5 456 aaKnown RBP18.81■□□□□ 0.6
TPM1-214ENST00000558544 IKBKBO14920 756 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 SPTLC1O15269 473 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 PHACTR2O75167 634 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 GNA14O95837 355 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 C4BPAP04003 597 aaKnown RBP18.81■□□□□ 0.6
TPM1-214ENST00000558544 TAF6P49848 677 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 LILRA4P59901 499 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 RBP5P82980 135 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
TPM1-214ENST00000558544 TIGD5Q53EQ6 642 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 HSP90AA4PQ58FG1 418 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 TMC7Q7Z402 723 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 CREBRFQ8IUR6 639 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 ENOX1Q8TC92 643 aaKnown RBP18.81■□□□□ 0.6
TPM1-214ENST00000558544 MICAL1Q8TDZ2 1067 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 THAP9Q9H5L6 903 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 STK39Q9UEW8 545 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 R3HCC1Q9Y3T6 440 aaKnown RBP18.81■□□□□ 0.6
TPM1-214ENST00000558544 NFE2L3Q9Y4A8 694 aa18.81■□□□□ 0.6
TPM1-214ENST00000558544 PLXNA3P51805 1871 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 C2CD2LO14523 706 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 FSCN2O14926 492 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 TRAPPC3O43617 180 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 URODP06132 367 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 CTSAP10619 480 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
TPM1-214ENST00000558544 GLUD2P49448 558 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 AARSP49588 968 aaKnown RBP eCLIP18.8■□□□□ 0.6
TPM1-214ENST00000558544 MARSP56192 900 aaKnown RBP18.8■□□□□ 0.6
TPM1-214ENST00000558544 MCCD1P59942 119 aaPredicted RBP18.8■□□□□ 0.6
TPM1-214ENST00000558544 USP41Q3LFD5 358 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 SV2CQ496J9 727 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 RTP2Q5QGT7 225 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 DSTYKQ6XUX3 929 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 SV2AQ7L0J3 742 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 CEP57Q86XR8 500 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 LRRC52Q8N7C0 313 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 SLC35C1Q96A29 364 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms