RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 MYH11P35749 1972 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 LACTBL1A8MY62 500 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 CD72P21854 359 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 CEBPZQ03701 1054 aaKnown RBP16.92■□□□□ 0.3
TPM1-211ENST00000558314 ADCY1Q08828 1119 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 USP37Q86T82 979 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 ELMOD1Q8N336 334 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 RAD54LQ92698 747 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 TCEAL4Q96EI5 215 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 SHDQ96IW2 340 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 SUSD3Q96L08 255 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 PGLYRP2Q96PD5 576 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 MSTO1Q9BUK6 570 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 RPF1Q9H9Y2 349 aaKnown RBP16.92■□□□□ 0.3
TPM1-211ENST00000558314 PARVGQ9HBI0 331 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 KCNH3Q9ULD8 1083 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 ODF2LQ9ULJ1 636 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 TBX20Q9UMR3 447 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 PCDHB8Q9UN66 801 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 INSL5Q9Y5Q6 135 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 R4GN57 208 aa16.92■□□□□ 0.3
TPM1-211ENST00000558314 CITO14578 2027 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 TRAK2O60296 914 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 ABLIM3O94929 683 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 OR4Q2P0C623 313 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 MYL4P12829 197 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 ATF2P15336 505 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 NMT1P30419 496 aaKnown RBP16.91■□□□□ 0.3
TPM1-211ENST00000558314 CDR1P51861 262 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 TWF1Q12792 350 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 GRM2Q14416 872 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 MLF2Q15773 248 aaPredicted RBP16.91■□□□□ 0.3
TPM1-211ENST00000558314 SLC44A4Q53GD3 710 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 RNF19BQ6ZMZ0 732 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 PDZD4Q76G19 769 aaPredicted RBP16.91■□□□□ 0.3
TPM1-211ENST00000558314 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 HS6ST3Q8IZP7 471 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 KCTD17Q8N5Z5 321 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 ZNF512Q96ME7 567 aaPredicted RBP16.91■□□□□ 0.3
TPM1-211ENST00000558314 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
TPM1-211ENST00000558314 UBQLN1Q9UMX0 589 aaKnown RBP16.91■□□□□ 0.3
TPM1-211ENST00000558314 ARHGEF37A1IGU5 675 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 PROB1E7EW31 1015 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 BMP15O95972 392 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 GJA1P17302 382 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
TPM1-211ENST00000558314 YWHAHQ04917 246 aaPredicted RBP16.9■□□□□ 0.3
TPM1-211ENST00000558314 CYP4A22Q5TCH4 519 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 PHLDB3Q6NSJ2 640 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 DYMQ7RTS9 669 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 TCEAL8Q8IYN2 117 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 ADSSL1Q8N142 457 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 PJA1Q8NG27 643 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 PLA2G2FQ9BZM2 168 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 PLEKHA5Q9HAU0 1116 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 BLOC1S4Q9NUP1 217 aa16.9■□□□□ 0.3
TPM1-211ENST00000558314 COL4A3Q01955 1670 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 TTC26A0AVF1 554 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 OGTO15294 1046 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 XPOTO43592 962 aaKnown RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 TBC1D4O60343 1298 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 POU2F2P09086 479 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 PFKPQ01813 784 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 MRPL58Q14197 206 aaKnown RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 ENOX2Q16206 610 aaKnown RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 ZC2HC1CQ53FD0 456 aaPredicted RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 TPGS2Q68CL5 300 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 JADE1Q6IE81 842 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 TPRG1Q6ZUI0 275 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 RTL10Q7L3V2 364 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 LARP4BQ92615 738 aaKnown RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 EPSTI1Q96J88 318 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 HINFPQ9BQA5 517 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 SLITRK6Q9H5Y7 841 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 SPATA6Q9NWH7 488 aaPredicted RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 GDE1Q9NZC3 331 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 AFF4Q9UHB7 1163 aaKnown RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 MTF2Q9Y483 593 aaPredicted RBP16.89■□□□□ 0.29
TPM1-211ENST00000558314 CLIC4Q9Y696 253 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 MYH15Q9Y2K3 1946 aa16.89■□□□□ 0.29
TPM1-211ENST00000558314 KANSL1LA0AUZ9 987 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 FAM170BA6NMN3 283 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 TISP43B9A030 160 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 ZNF197O14709 1029 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 PPEF2O14830 753 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 GLULP15104 373 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 ACOT2P49753 483 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 KYAT1Q16773 422 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 ADALQ6DHV7 355 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 FAM173BQ6P4H8 233 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 KRI1Q8N9T8 703 aaKnown RBP16.88■□□□□ 0.29
TPM1-211ENST00000558314 BEST2Q8NFU1 509 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 BCO2Q9BYV7 579 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 ASAH2Q9NR71 780 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 HEBP1Q9NRV9 189 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 TBC1D7Q9P0N9 293 aa16.88■□□□□ 0.29
TPM1-211ENST00000558314 CEP72Q9P209 647 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms