RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 DDIASQ8IXT1 998 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 ABHD8Q96I13 439 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 ERGIC2Q96RQ1 377 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 NDNQ99608 321 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 STK33Q9BYT3 514 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATP7BP35670 1465 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 H2AFYO75367 372 aaKnown RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 PEX5P50542 639 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 XRCC4Q13426 336 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 DGUOKQ16854 277 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 AGAP11Q8TF27 550 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ITFG2Q969R8 447 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 DNAJC7Q99615 494 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 C11orf70Q9BRQ4 267 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 PARVAQ9NVD7 372 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 LOC100653049A0A140TA62 436 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 KRT34O76011 436 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 WEE2P0C1S8 567 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 SERPINH1P50454 418 aaKnown RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 LRRC24Q50LG9 513 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 DGKHQ86XP1 1220 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 RNF217Q8TC41 542 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 APBB2Q92870 758 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 AGPAT5Q9NUQ2 364 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZC3H7BQ9UGR2 993 aaKnown RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 MAP3K13O43283 966 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 RHOBTB3O94955 611 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 APOA4P06727 396 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 NUDT2P50583 147 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ITGA8P53708 1063 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ACTR2P61160 394 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 TAF2Q6P1X5 1199 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 CLVS1Q8IUQ0 354 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 BBS7Q8IWZ6 715 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ACTRT1Q8TDG2 376 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 LMTK2Q8IWU2 1503 aa12.33□□□□□ -0.44
CSPG4P12-201ENST00000558282 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 FOXN1O15353 648 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 KLHL41O60662 606 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 ALOX5P09917 674 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 CHI3L2Q15782 390 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 C4orf22Q6V702 233 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZBTB49Q6ZSB9 765 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 MTDHQ86UE4 582 aaKnown RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 SIX5Q8N196 739 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 GDPD5Q8WTR4 605 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 SLC7A3Q8WY07 619 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 PHF21AQ96BD5 680 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 GOLGA8JA6NMD2 632 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 TM9SF1O15321 606 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 PSTPIP1O43586 416 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 RASA2Q15283 850 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 FAM160B1Q5W0V3 765 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 ARL10Q8N8L6 244 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 AENQ8WTP8 325 aaKnown RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 WHRNQ9P202 907 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZNF219Q9P2Y4 722 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 WFS1O76024 890 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 MYL2P10916 166 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 RPS6KA3P51812 740 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 NR1H2P55055 460 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 BNC1Q01954 994 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 CDC26Q8NHZ8 85 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZNF507Q8TCN5 953 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 TMEM79Q9BSE2 394 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 MAGED2Q9UNF1 606 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 LEMD3Q9Y2U8 911 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 MEIS1O00470 390 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 PDXKO00764 312 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 LSM1O15116 133 aaKnown RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 PHGDHO43175 533 aaKnown RBP12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 CHN2P52757 468 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 KCNA1Q09470 495 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 CHRNA2Q15822 529 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 RBBP8Q99708 897 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 BHMT2Q9H2M3 363 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms