RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ABCD1P33897 745 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 HSPA9P38646 679 aaKnown RBP11.27□□□□□ -0.61
TPM1-210ENST00000558264 DHX9Q08211 1270 aaKnown RBP11.27□□□□□ -0.61
TPM1-210ENST00000558264 TTLL4Q14679 1199 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 ATF7IP2Q5U623 682 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 CCDC137Q6PK04 289 aaKnown RBP11.27□□□□□ -0.61
TPM1-210ENST00000558264 ZPBP2Q6X784 338 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 CPB2Q96IY4 423 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 NAP1L3Q99457 506 aaPredicted RBP11.27□□□□□ -0.61
TPM1-210ENST00000558264 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 ADAM22Q9P0K1 906 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 POLIQ9UNA4 740 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 DIS3Q9Y2L1 958 aaKnown RBP11.27□□□□□ -0.61
TPM1-210ENST00000558264 PCDHA3Q9Y5H8 950 aa11.27□□□□□ -0.61
TPM1-210ENST00000558264 PDHXO00330 501 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 OGTO15294 1046 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 PHF2O75151 1096 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 INSRRP14616 1297 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 EFNA5P52803 228 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 RWDD2BP57060 319 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 NOMO3P69849 1222 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 MXD4Q14582 209 aaPredicted RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 CDCA2Q69YH5 1023 aaPredicted RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 MON1BQ7L1V2 547 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 SLC13A5Q86YT5 568 aaPredicted RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 ABRAQ8N0Z2 381 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 UHMK1Q8TAS1 419 aaKnown RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 AFG1LQ8WV93 481 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 TCP11Q8WWU5 503 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 MROH8Q9H579 483 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 PSD3Q9NYI0 1048 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 BCCIPQ9P287 314 aaKnown RBP eCLIP11.26□□□□□ -0.61
TPM1-210ENST00000558264 EVPLQ92817 2033 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 A0A087WZ62 844 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 CCDC66A2RUB6 948 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 GOLGA8KD6RF30 607 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 KIAA0391O15091 583 aaKnown RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 CYP1A1P04798 512 aaPredicted RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 TMEM191BP0C7N4 346 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 TCF4P15884 667 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 HPDP32754 393 aaPredicted RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 ACTN2P35609 894 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 CENPCQ03188 943 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 PPFIA1Q13136 1202 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 TRPC3Q13507 836 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 TCEAL1Q15170 157 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 TRIP13Q15645 432 aaPredicted RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 LEKR1Q6ZMV7 388 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 CCDC50Q8IVM0 306 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 C1orf131Q8NDD1 294 aaKnown RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 FBXO25Q8TCJ0 367 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 FDXACB1Q9BRP7 624 aaPredicted RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 ERP44Q9BS26 406 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 MAF1Q9H063 256 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 SMARCAD1Q9H4L7 1026 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 CPSF3Q9UKF6 684 aaKnown RBP11.26□□□□□ -0.61
TPM1-210ENST00000558264 AKT3Q9Y243 479 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 GINS2Q9Y248 185 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 SIP14410 1827 aa11.26□□□□□ -0.61
TPM1-210ENST00000558264 IGKV6-21A0A0C4DH24 114 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 BTBD19C9JJ37 291 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 MYO1FO00160 1098 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 ASS1P00966 412 aaKnown RBP11.25□□□□□ -0.61
TPM1-210ENST00000558264 LGALS2P05162 132 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 HOXC6P09630 235 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 FGFR4P22455 802 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 TMOD1P28289 359 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 PTGIRP43119 386 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 TAS2R40P59535 323 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 RPL7AP62424 266 aaKnown RBP11.25□□□□□ -0.61
TPM1-210ENST00000558264 ARHGAP1Q07960 439 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 PDCLQ13371 301 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 DUPD1Q68J44 220 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 MPZL3Q6UWV2 235 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 LRRC31Q6UY01 552 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 TMC3Q7Z5M5 1100 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 WDR49Q8IV35 697 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 MREGQ8N565 214 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 ZNF606Q8WXB4 792 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
TPM1-210ENST00000558264 FMO2Q99518 471 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 CDT1Q9H211 546 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 CISHQ9NSE2 258 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
TPM1-210ENST00000558264 GPR25O00155 361 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 C22orf31O95567 290 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 NFICP08651 508 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 RPL21P46778 160 aaKnown RBP11.25□□□□□ -0.61
TPM1-210ENST00000558264 CDH8P55286 799 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 BPIFB4P59827 614 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 MBTD1Q05BQ5 628 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 MCL1Q07820 350 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 SIX1Q15475 284 aaPredicted RBP11.25□□□□□ -0.61
TPM1-210ENST00000558264 DUOXA2Q1HG44 320 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 ATP13A4Q4VNC1 1196 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 CYP4A22Q5TCH4 519 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 GPRC5AQ8NFJ5 357 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms