RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 STK33Q9BYT3 514 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 KANSL3Q9P2N6 904 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 INPP5FQ9Y2H2 1132 aa18.14■□□□□ 0.49
SNX1-203ENST00000558040 ALPK3Q96L96 1907 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.13■□□□□ 0.49
SNX1-203ENST00000558040 CCDC85CA6NKD9 419 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 BAIAP3O94812 1187 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 P4HA1P13674 534 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 PNPLA4P41247 253 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 GUCY2FP51841 1108 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 FPGSQ05932 587 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 ARID5BQ14865 1188 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 ZNF667Q5HYK9 610 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 PDXDC1Q6P996 788 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 GJB7Q6PEY0 223 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 ARHGEF19Q8IW93 802 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 GSTCDQ8NEC7 633 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 CXorf38Q8TB03 319 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 HELQQ8TDG4 1101 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 SYN2Q92777 582 aaPredicted RBP18.13■□□□□ 0.49
SNX1-203ENST00000558040 JAKMIP2Q96AA8 810 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 ZNF560Q96MR9 790 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 NIF3L1Q9GZT8 377 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 VRTNQ9H8Y1 702 aa18.13■□□□□ 0.49
SNX1-203ENST00000558040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.13■□□□□ 0.493e-11■■■■■ 99.4
SNX1-203ENST00000558040 TRIP11Q15643 1979 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 ANO9A1A5B4 782 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 LRRC53A6NM62 1247 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 LRRN2O75325 713 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 AMHP03971 560 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 LRPAP1P30533 357 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 STAT1P42224 750 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 GOLGA8FQ08AF8 430 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 GOLGA8DPQ0D2H9 430 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 HS1BP3Q53T59 392 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 NOMO2Q5JPE7 1267 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 SFMBT2Q5VUG0 894 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 C9orf57Q5W0N0 161 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 SMYD5Q6GMV2 418 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 LRRC8AQ8IWT6 810 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 TATDN2Q93075 761 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 HPDLQ96IR7 371 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 XYLT2Q9H1B5 865 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 RNF19AQ9NV58 838 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 PLAGL2Q9UPG8 496 aa18.12■□□□□ 0.49
SNX1-203ENST00000558040 MICAL3Q7RTP6 2002 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 TET1Q8NFU7 2136 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 F8VZ95 297 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 RNF225M0QZC1 329 aaPredicted RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 POMCP01189 267 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 CCDC172P0C7W6 258 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 FGFR1P11362 822 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 RPL9P32969 192 aaKnown RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 JAM2P57087 298 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 YWHAEP62258 255 aaKnown RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 TUSC3Q13454 348 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 CUL2Q13617 745 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 DRAP1Q14919 205 aaPredicted RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 ARHGAP44Q17R89 818 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 CLLU1OSQ5K130 101 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 SPOPLQ6IQ16 392 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 BADQ92934 168 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 VWCEQ96DN2 955 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 DDX27Q96GQ7 796 aaKnown RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 UROC1Q96N76 676 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 MRPL9Q9BYD2 267 aaKnown RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 APOBEC3GQ9HC16 384 aaKnown RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 MIOSQ9NXC5 875 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 AJAP1Q9UKB5 411 aaPredicted RBP18.11■□□□□ 0.49
SNX1-203ENST00000558040 NUB1Q9Y5A7 615 aa18.11■□□□□ 0.49
SNX1-203ENST00000558040 LTBP2Q14767 1821 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 PIRO00625 290 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 HNRNPH3P31942 346 aaKnown RBP18.1■□□□□ 0.49
SNX1-203ENST00000558040 SOX5P35711 763 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 AFF1P51825 1210 aaKnown RBP18.1■□□□□ 0.49
SNX1-203ENST00000558040 TNNC1P63316 161 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 RNASELQ05823 741 aaKnown RBP18.1■□□□□ 0.49
SNX1-203ENST00000558040 SOX4Q06945 474 aaPredicted RBP18.1■□□□□ 0.49
SNX1-203ENST00000558040 NAB2Q15742 525 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 ASIC2Q16515 512 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 WDR72Q3MJ13 1102 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 SV2CQ496J9 727 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 BAG1Q99933 345 aaPredicted RBP18.1■□□□□ 0.49
SNX1-203ENST00000558040 GOLGA2P5Q9HBQ8 144 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 NXF1Q9UBU9 619 aaKnown RBP18.1■□□□□ 0.49
SNX1-203ENST00000558040 DNAH12Q6ZR08 3092 aa18.1■□□□□ 0.49
SNX1-203ENST00000558040 ACRP10323 421 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 FERP16591 822 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 PAX3P23760 479 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 KCNJ6P48051 423 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 TAF6P49848 677 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 PSRC1Q6PGN9 363 aaPredicted RBP18.09■□□□□ 0.49
SNX1-203ENST00000558040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.09■□□□□ 0.492e-8■■■■■ 31.5
SNX1-203ENST00000558040 CRIPAKQ8N1N5 446 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 SHC3Q92529 594 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 DPF3Q92784 378 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 KREMEN1Q96MU8 473 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 FAM193BQ96PV7 902 aaPredicted RBP18.09■□□□□ 0.49
SNX1-203ENST00000558040 LBHD1Q9BQE6 289 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms