RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CXCL14O95715 111 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 TNNC2P02585 160 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 CA8P35219 290 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 BRCC3P46736 316 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 SMC1AQ14683 1233 aaKnown RBP27.6■■■□□ 2.01
SMAD6-202ENST00000557916 FAM171A1Q5VUB5 890 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 INTS8Q75QN2 995 aaKnown RBP27.6■■■□□ 2.01
SMAD6-202ENST00000557916 TMC2Q8TDI7 906 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 AUTS2Q8WXX7 1259 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 B3GALT6Q96L58 329 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 NSUN3Q9H649 340 aaKnown RBP27.6■■■□□ 2.01
SMAD6-202ENST00000557916 RWDD2AQ9UIY3 292 aa27.6■■■□□ 2.01
SMAD6-202ENST00000557916 LRRIQ3A6PVS8 624 aaPredicted RBP27.59■■■□□ 2.01
SMAD6-202ENST00000557916 I3L4J1 428 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 ITGB3P05106 788 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 URODP06132 367 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 EPB41P11171 864 aaKnown RBP27.59■■■□□ 2.01
SMAD6-202ENST00000557916 KRT13P13646 458 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 KIAA1841Q6NSI8 718 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 SASS6Q6UVJ0 657 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 CSGALNACT2Q8N6G5 542 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 MRPL43Q8N983 215 aaKnown RBP27.59■■■□□ 2.01
SMAD6-202ENST00000557916 CHST7Q9NS84 486 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 DACH1Q9UI36 760 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 ITGA11Q9UKX5 1188 aa27.59■■■□□ 2.01
SMAD6-202ENST00000557916 SLC16A3O15427 465 aaKnown RBP27.58■■■□□ 2.01
SMAD6-202ENST00000557916 POLR2BP30876 1174 aaKnown RBP27.58■■■□□ 2.01
SMAD6-202ENST00000557916 GLUD2P49448 558 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 VAMP7P51809 220 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 DLG4P78352 724 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 CLDN10P78369 228 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 CCDC85BQ15834 202 aaPredicted RBP27.58■■■□□ 2.01
SMAD6-202ENST00000557916 USP37Q86T82 979 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 CEP57Q86XR8 500 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 ZNF516Q92618 1163 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 CEP63Q96MT8 703 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 MRPL17Q9NRX2 175 aaKnown RBP27.58■■■□□ 2.01
SMAD6-202ENST00000557916 AGAP1Q9UPQ3 857 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 MYO7AQ13402 2215 aa27.58■■■□□ 2.01
SMAD6-202ENST00000557916 HIDE1A8MVS5 230 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 C2CD2LO14523 706 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 KRT19P08727 400 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 LILRA4P59901 499 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 DSG1Q02413 1049 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 PTPN14Q15678 1187 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 TCEAL5Q5H9L2 206 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 TRAPPC11Q7Z392 1133 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 ADGRD2Q7Z7M1 963 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 PPM1EQ8WY54 764 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 PPP2R3CQ969Q6 453 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 TTPALQ9BTX7 342 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 SSX2IPQ9Y2D8 614 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 IRAK3Q9Y616 596 aa27.58■■■□□ 2
SMAD6-202ENST00000557916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.57■■■□□ 2
SMAD6-202ENST00000557916 C2orf71A6NGG8 1288 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 AP3M2P53677 418 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 RBP5P82980 135 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 BFSP1Q12934 665 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 SKOR2Q2VWA4 1001 aaPredicted RBP27.57■■■□□ 2
SMAD6-202ENST00000557916 KIAA0319Q5VV43 1072 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.57■■■□□ 2
SMAD6-202ENST00000557916 FILIP1Q7Z7B0 1213 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 CXorf38Q8TB03 319 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 BORCS6Q96GS4 357 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 SUSD3Q96L08 255 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 SIX4Q9UIU6 781 aa27.57■■■□□ 2
SMAD6-202ENST00000557916 R3HCC1Q9Y3T6 440 aaKnown RBP27.57■■■□□ 2
SMAD6-202ENST00000557916 FGFR3P22607 806 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 PAX3P23760 479 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 AARSP49588 968 aaKnown RBP eCLIP27.56■■■□□ 2
SMAD6-202ENST00000557916 TAF6P49848 677 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 ENPEPQ07075 957 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 RTP2Q5QGT7 225 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 SCARA3Q6AZY7 606 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 RBM23Q86U06 439 aaKnown RBP27.56■■■□□ 2
SMAD6-202ENST00000557916 MAFAQ8NHW3 353 aaPredicted RBP27.56■■■□□ 2
SMAD6-202ENST00000557916 RIN2Q8WYP3 895 aaPredicted RBP27.56■■■□□ 2
SMAD6-202ENST00000557916 ZNF560Q96MR9 790 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 TLE6Q9H808 572 aa27.56■■■□□ 2
SMAD6-202ENST00000557916 IKBKBO14920 756 aa27.55■■■□□ 2
SMAD6-202ENST00000557916 SPTLC1O15269 473 aa27.55■■■□□ 2
SMAD6-202ENST00000557916 LILRB3O75022 631 aa27.55■■■□□ 2
SMAD6-202ENST00000557916 TKTP29401 623 aaKnown RBP27.55■■■□□ 2
SMAD6-202ENST00000557916 PNPLA4P41247 253 aa27.55■■■□□ 2
SMAD6-202ENST00000557916 DSTYKQ6XUX3 929 aa27.55■■■□□ 2
SMAD6-202ENST00000557916 GPR65Q8IYL9 337 aa27.55■■■□□ 2
SMAD6-202ENST00000557916 MED15Q96RN5 788 aa27.55■■■□□ 2
SMAD6-202ENST00000557916 SRRTQ9BXP5 876 aaKnown RBP27.55■■■□□ 2
SMAD6-202ENST00000557916 SYN3O14994 580 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 TRIM49P0CI25 452 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 TRIM49CP0CI26 452 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 ERCC5P28715 1186 aaPredicted RBP27.54■■■□□ 2
SMAD6-202ENST00000557916 NRIP1P48552 1158 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 MCCD1P59942 119 aaPredicted RBP27.54■■■□□ 2
SMAD6-202ENST00000557916 BIRC3Q13489 604 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 CT47A1Q5JQC4 288 aaPredicted RBP27.54■■■□□ 2
SMAD6-202ENST00000557916 C1orf220Q5T0J3 134 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 LRRC52Q8N7C0 313 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 ANO10Q9NW15 660 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 ARMCX3Q9UH62 379 aaPredicted RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms