RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PANK2Q9BZ23 570 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 GOLPH3LQ9H4A5 285 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 CACNG4Q9UBN1 327 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 PHLPP2Q6ZVD8 1323 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 NPHP3-ACAD11A0A0J9YXS1 232 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 A0A1B0GVL5 298 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 K7ERI5 159 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 OR1D2P34982 312 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 NTHL1P78549 312 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 DCAF4L1Q3SXM0 396 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 PABPC1LQ4VXU2 614 aaKnown RBP18.15■□□□□ 0.5
NEK9-211ENST00000557673 ATF7IP2Q5U623 682 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 IQUBQ8NA54 791 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 ST13P5Q8NFI4 369 aaPredicted RBP18.15■□□□□ 0.5
NEK9-211ENST00000557673 NELL2Q99435 816 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 PYM1Q9BRP8 204 aaKnown RBP18.15■□□□□ 0.5
NEK9-211ENST00000557673 CXCL16Q9H2A7 254 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 TNMDQ9H2S6 317 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 MAGEF1Q9HAY2 307 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 KMT5AQ9NQR1 393 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 SPATA6Q9NWH7 488 aaPredicted RBP18.15■□□□□ 0.5
NEK9-211ENST00000557673 ARHGAP28Q9P2N2 729 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 ODF2LQ9ULJ1 636 aa18.15■□□□□ 0.5
NEK9-211ENST00000557673 FAM170BA6NMN3 283 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 TMEM189-UBE2V1I3L0A0 370 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 SPTLC1O15269 473 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 NCAM2O15394 837 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 B3GAT3O94766 335 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 GLULP15104 373 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 FGFR3P22607 806 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 NDUFA8P51970 172 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 CACNB1Q02641 598 aaPredicted RBP18.14■□□□□ 0.49
NEK9-211ENST00000557673 UBXN2BQ14CS0 331 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 SV2BQ7L1I2 683 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 TAS1R3Q7RTX0 852 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 ITFG1Q8TB96 612 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 ATRIPQ8WXE1 791 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 UROC1Q96N76 676 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 KBTBD4Q9NVX7 518 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 GDE1Q9NZC3 331 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 MTRRQ9UBK8 725 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 GDAQ9Y2T3 454 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 PCDHGA2Q9Y5H1 932 aa18.14■□□□□ 0.49
NEK9-211ENST00000557673 MYMKA6NI61 221 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 SLC16A4O15374 487 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 ACTN4O43707 911 aaKnown RBP18.13■□□□□ 0.49
NEK9-211ENST00000557673 ZNF131P52739 623 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 NAB2Q15742 525 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 ZBTB41Q5SVQ8 909 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 CLEC17AQ6ZS10 378 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 ANKS3Q6ZW76 656 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 GPR161Q8N6U8 529 aaKnown RBP18.13■□□□□ 0.49
NEK9-211ENST00000557673 SECISBP2LQ93073 1101 aaKnown RBP18.13■□□□□ 0.49
NEK9-211ENST00000557673 TMEM134Q9H6X4 195 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 C17orf75Q9HAS0 396 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 TNFSF13BQ9Y275 285 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 MRPS17Q9Y2R5 130 aaKnown RBP18.13■□□□□ 0.49
NEK9-211ENST00000557673 MRPS23Q9Y3D9 190 aaKnown RBP18.13■□□□□ 0.49
NEK9-211ENST00000557673 BACE2Q9Y5Z0 518 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 CACNA1IQ9P0X4 2223 aa18.13■□□□□ 0.49
NEK9-211ENST00000557673 OTOGLQ3ZCN5 2332 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 ADAM12O43184 909 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 TBCAO75347 108 aaKnown RBP18.12■□□□□ 0.49
NEK9-211ENST00000557673 ECI2O75521 394 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 KRT18P05783 430 aaKnown RBP18.12■□□□□ 0.49
NEK9-211ENST00000557673 PLS3P13797 630 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 SDHBP21912 280 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 SYKP43405 635 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 NPAS3Q8IXF0 933 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 MAML2Q8IZL2 1156 aaPredicted RBP18.12■□□□□ 0.49
NEK9-211ENST00000557673 SUMF1Q8NBK3 374 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 DDX12PQ92771 950 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 ACO2Q99798 780 aaKnown RBP18.12■□□□□ 0.49
NEK9-211ENST00000557673 KXD1Q9BQD3 176 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 TARS2Q9BW92 718 aaKnown RBP18.12■□□□□ 0.49
NEK9-211ENST00000557673 MRPL4Q9BYD3 311 aaKnown RBP18.12■□□□□ 0.49
NEK9-211ENST00000557673 CDT1Q9H211 546 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 LTB4R2Q9NPC1 389 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 DNMT3BQ9UBC3 853 aaKnown RBP18.12■□□□□ 0.49
NEK9-211ENST00000557673 USP25Q9UHP3 1055 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 CDY1Q9Y6F8 540 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 FRYLO94915 3013 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 DMXL1Q9Y485 3027 aa18.12■□□□□ 0.49
NEK9-211ENST00000557673 GOLGA6L4A6NEF3 574 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 LRRN2O75325 713 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 FAM13AO94988 1023 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 SLFN14P0C7P3 912 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 ELF1P32519 619 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
NEK9-211ENST00000557673 ZNF568Q3ZCX4 644 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 VARS2Q5ST30 1063 aaKnown RBP18.11■□□□□ 0.49
NEK9-211ENST00000557673 ZNF852Q6ZMS4 543 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 CEP120Q8N960 986 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 SPIRE2Q8WWL2 714 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 DNAJC19Q96DA6 116 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 PPP1R10Q96QC0 940 aaKnown RBP18.11■□□□□ 0.49
NEK9-211ENST00000557673 AVENQ9NQS1 362 aaPredicted RBP18.11■□□□□ 0.49
NEK9-211ENST00000557673 TOPORSQ9NS56 1045 aaPredicted RBP18.11■□□□□ 0.49
NEK9-211ENST00000557673 NCDNQ9UBB6 729 aa18.11■□□□□ 0.49
NEK9-211ENST00000557673 TRIP11Q15643 1979 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms