RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
PSEN1-223ENST00000557511 DERAQ9Y315 318 aa9.04□□□□□ -0.96
PSEN1-223ENST00000557511 IRAK3Q9Y616 596 aa9.04□□□□□ -0.96
PSEN1-223ENST00000557511 STYXL1Q9Y6J8 313 aa9.04□□□□□ -0.96
PSEN1-223ENST00000557511 NLRC5Q86WI3 1866 aa9.04□□□□□ -0.96
PSEN1-223ENST00000557511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 ZNF233A6NK53 670 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 HIDE1A8MVS5 230 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 LACTBL1A8MY62 500 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 H3BQ06 376 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 H7C4K7 107 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 TMEM189-UBE2V1I3L0A0 370 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 EXTL3O43909 919 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 KIF4AO95239 1232 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 RPN1P04843 607 aaKnown RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 HOXB8P17481 243 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 NDUFV2P19404 249 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 TNFSF9P41273 254 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 ACOT2P49753 483 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 DSG1Q02413 1049 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 PTPN14Q15678 1187 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 LEXMQ3ZCV2 418 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 PTCRAQ6ISU1 281 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 ALKAL1Q6UXT8 129 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 DSTYKQ6XUX3 929 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 RNF19BQ6ZMZ0 732 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 NT5DC4Q86YG4 428 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 GPD1LQ8N335 351 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 APPL2Q8NEU8 664 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 ZNF507Q8TCN5 953 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 BCL7CQ8WUZ0 217 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 AUTS2Q8WXX7 1259 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 RABGGTAQ92696 567 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 STRA6Q9BX79 667 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 PCIF1Q9H4Z3 704 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 GOLGA2P5Q9HBQ8 144 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 MARCH5Q9NX47 278 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 RBAKQ9NYW8 714 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-223ENST00000557511 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
PSEN1-223ENST00000557511 SZT2Q5T011 3432 aa9.02□□□□□ -0.96
PSEN1-223ENST00000557511 MYO9BQ13459 2157 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 TTC26A0AVF1 554 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 GOLGA6L22H0YM25 854 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 CALUO43852 315 aaPredicted RBP9.02□□□□□ -0.97
PSEN1-223ENST00000557511 B4GALT3O60512 393 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 EXOC3O60645 756 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
PSEN1-223ENST00000557511 CLSTN1O94985 981 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 GLUD1P00367 558 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 TNNC2P02585 160 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 TMEM191BP0C7N4 346 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 CASP1P29466 404 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 GTF2F1P35269 517 aaKnown RBP eCLIP9.02□□□□□ -0.97
PSEN1-223ENST00000557511 CASP5P51878 434 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 TFF2Q03403 129 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 SPAG1Q07617 926 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 KCNA1Q09470 495 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 STIM1Q13586 685 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 CLUL1Q15846 466 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
PSEN1-223ENST00000557511 PSMD5Q16401 504 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 UPP1Q16831 310 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 KNOP1Q1ED39 458 aaKnown RBP9.02□□□□□ -0.97
PSEN1-223ENST00000557511 JADE1Q6IE81 842 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 SLC39A4Q6P5W5 647 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 ANKS3Q6ZW76 656 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 USP37Q86T82 979 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 XXYLT1Q8NBI6 393 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 HPS3Q969F9 1004 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 SMARCE1Q969G3 411 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 SAAL1Q96ER3 474 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 ANKRD36BP1Q96IX9 119 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 ZNF560Q96MR9 790 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 TIGD1Q96MW7 591 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 GBP4Q96PP9 640 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 KLHL5Q96PQ7 755 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 FNBP1Q96RU3 617 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 POP1Q99575 1024 aaKnown RBP9.02□□□□□ -0.97
PSEN1-223ENST00000557511 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
PSEN1-223ENST00000557511 GPR62Q9BZJ7 368 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 GOLPH3LQ9H4A5 285 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 FNIP2Q9P278 1114 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 C2CD2Q9Y426 696 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 HCFC2Q9Y5Z7 792 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 MYH11P35749 1972 aa9.02□□□□□ -0.97
PSEN1-223ENST00000557511 LAMA2P24043 3122 aaKnown RBP9.01□□□□□ -0.97
PSEN1-223ENST00000557511 GOLGA8IPA6NC78 632 aa9.01□□□□□ -0.97
PSEN1-223ENST00000557511 GOLGA8JA6NMD2 632 aa9.01□□□□□ -0.97
PSEN1-223ENST00000557511 TISP43B9A030 160 aa9.01□□□□□ -0.97
PSEN1-223ENST00000557511 SYN3O14994 580 aa9.01□□□□□ -0.97
PSEN1-223ENST00000557511 CLIC2O15247 247 aa9.01□□□□□ -0.97
PSEN1-223ENST00000557511 LINC01565O15544 149 aa9.01□□□□□ -0.97
PSEN1-223ENST00000557511 PRPF40AO75400 957 aaKnown RBP9.01□□□□□ -0.97
PSEN1-223ENST00000557511 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
PSEN1-223ENST00000557511 CNPP09543 421 aaKnown RBP9.01□□□□□ -0.97
PSEN1-223ENST00000557511 RPL13P26373 211 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms