RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SURF1Q15526 300 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 PTPN14Q15678 1187 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 CCDC85BQ15834 202 aaPredicted RBP22.61■■□□□ 1.21
SEC23A-213ENST00000557280 TIGD5Q53EQ6 642 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 TCEAL5Q5H9L2 206 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 RTP2Q5QGT7 225 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 TMC7Q7Z402 723 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 MICAL1Q8TDZ2 1067 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 BORCS6Q96GS4 357 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 VWA8A3KMH1 1905 aa22.61■■□□□ 1.21
SEC23A-213ENST00000557280 C2orf71A6NGG8 1288 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 MAPK13O15264 365 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 TNNI1P19237 187 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 TKTP29401 623 aaKnown RBP22.6■■□□□ 1.21
SEC23A-213ENST00000557280 CA8P35219 290 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 GTF2F1P35269 517 aaKnown RBP eCLIP22.6■■□□□ 1.212e-7■□□□□ 11.1
SEC23A-213ENST00000557280 FAM171A1Q5VUB5 890 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 PPM1EQ8WY54 764 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 ANKRD36BP1Q96IX9 119 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 NSUN3Q9H649 340 aaKnown RBP22.6■■□□□ 1.21
SEC23A-213ENST00000557280 CHST7Q9NS84 486 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 RWDD2AQ9UIY3 292 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 STXBP5LQ9Y2K9 1186 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 NUB1Q9Y5A7 615 aa22.6■■□□□ 1.21
SEC23A-213ENST00000557280 SCN1AP35498 2009 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.59■■□□□ 1.21
SEC23A-213ENST00000557280 BICDL2A1A5D9 508 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 EPB41P11171 864 aaKnown RBP22.59■■□□□ 1.21
SEC23A-213ENST00000557280 GLUD2P49448 558 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 AARSP49588 968 aaKnown RBP eCLIP22.59■■□□□ 1.21
SEC23A-213ENST00000557280 VAMP7P51809 220 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 CLDN10P78369 228 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 SMC1AQ14683 1233 aaKnown RBP22.59■■□□□ 1.21
SEC23A-213ENST00000557280 DUOXA2Q1HG44 320 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 PRSS55Q6UWB4 352 aaPredicted RBP22.59■■□□□ 1.21
SEC23A-213ENST00000557280 CSGALNACT2Q8N6G5 542 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 CACTINQ8WUQ7 758 aaKnown RBP22.59■■□□□ 1.21
SEC23A-213ENST00000557280 MKNK1Q9BUB5 465 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 ITGA11Q9UKX5 1188 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 AGAP1Q9UPQ3 857 aa22.59■■□□□ 1.21
SEC23A-213ENST00000557280 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.59■■□□□ 1.21
SEC23A-213ENST00000557280 PER2O15055 1255 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 SLC16A3O15427 465 aaKnown RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 LILRB3O75022 631 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 CXCL14O95715 111 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 TNNC2P02585 160 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 URODP06132 367 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 FGFR3P22607 806 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 LILRA4P59901 499 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 DSG1Q02413 1049 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 HYAL1Q12794 435 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 BFSP1Q12934 665 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 USP41Q3LFD5 358 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 KIAA0319Q5VV43 1072 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 TDRD10Q5VZ19 366 aaKnown RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 FOXR2Q6PJQ5 311 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 C11orf57Q6ZUT1 292 aaPredicted RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 INTS8Q75QN2 995 aaKnown RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 TRAPPC11Q7Z392 1133 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 RBM23Q86U06 439 aaKnown RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 CEP57Q86XR8 500 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 MRPL43Q8N983 215 aaKnown RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 MAFAQ8NHW3 353 aaPredicted RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 TMC2Q8TDI7 906 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 SUSD3Q96L08 255 aa22.58■■□□□ 1.21
SEC23A-213ENST00000557280 NGRNQ9NPE2 291 aaKnown RBP22.58■■□□□ 1.21
SEC23A-213ENST00000557280 KRT19P08727 400 aa22.57■■□□□ 1.2
SEC23A-213ENST00000557280 PTMSP20962 102 aa22.57■■□□□ 1.2
SEC23A-213ENST00000557280 NRIP1P48552 1158 aa22.57■■□□□ 1.2
SEC23A-213ENST00000557280 PPP3CAQ08209 521 aa22.57■■□□□ 1.2
SEC23A-213ENST00000557280 NFKBIBQ15653 356 aa22.57■■□□□ 1.2
SEC23A-213ENST00000557280 PDE12Q6L8Q7 609 aaKnown RBP22.57■■□□□ 1.2
SEC23A-213ENST00000557280 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.57■■□□□ 1.2
SEC23A-213ENST00000557280 RIN2Q8WYP3 895 aaPredicted RBP22.57■■□□□ 1.2
SEC23A-213ENST00000557280 CEP63Q96MT8 703 aa22.57■■□□□ 1.2
SEC23A-213ENST00000557280 TTPALQ9BTX7 342 aa22.57■■□□□ 1.2
SEC23A-213ENST00000557280 CST3P01034 146 aaPredicted RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 C4BPAP04003 597 aaKnown RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 KRT13P13646 458 aa22.56■■□□□ 1.2
SEC23A-213ENST00000557280 RPL17P18621 184 aaKnown RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 RBM10P98175 930 aaKnown RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 ELAVL2Q12926 359 aaKnown RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 KIAA1841Q6NSI8 718 aa22.56■■□□□ 1.2
SEC23A-213ENST00000557280 SASS6Q6UVJ0 657 aa22.56■■□□□ 1.2
SEC23A-213ENST00000557280 SYAP1Q96A49 352 aaPredicted RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 ELMO3Q96BJ8 720 aa22.56■■□□□ 1.2
SEC23A-213ENST00000557280 SRRTQ9BXP5 876 aaKnown RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 MRPL17Q9NRX2 175 aaKnown RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 STK39Q9UEW8 545 aa22.56■■□□□ 1.2
SEC23A-213ENST00000557280 TIMM13Q9Y5L4 95 aaPredicted RBP22.56■■□□□ 1.2
SEC23A-213ENST00000557280 IRAK3Q9Y616 596 aa22.56■■□□□ 1.2
SEC23A-213ENST00000557280 TSC2P49815 1807 aa22.56■■□□□ 1.2
SEC23A-213ENST00000557280 M0QZQ0 153 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 LINC01565O15544 149 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 VNN1O95497 513 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 CNPP09543 421 aaKnown RBP22.55■■□□□ 1.2
SEC23A-213ENST00000557280 GCLMP48507 274 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 TAF6P49848 677 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 MCCD1P59942 119 aaPredicted RBP22.55■■□□□ 1.2
SEC23A-213ENST00000557280 RBP5P82980 135 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms