RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CCDC169A6NNP5 214 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 TISP43B9A030 160 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 PI4K2BG5E9Z4 385 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 SLC16A4O15374 487 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 XYLBO75191 536 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 CSDE1O75534 798 aaKnown RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 RHOBTB3O94955 611 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 LETM1O95202 739 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 MED26O95402 600 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 VTNP04004 478 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 CYP2C9P11712 490 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 CST5P28325 142 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 SLC26A2P50443 739 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 ZNF131P52739 623 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 NRLP54845 237 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 CAPSQ13938 189 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 KCNB1Q14721 858 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 HSP90AA4PQ58FG1 418 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 FAM26FQ5R3K3 315 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 L1TD1Q5T7N2 865 aaKnown RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 GDF6Q6KF10 455 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 CNNM4Q6P4Q7 775 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 LUZP1Q86V48 1076 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 CCDC65Q8IXS2 484 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 METTL13Q8N6R0 699 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 SCFD1Q8WVM8 642 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 PRPF31Q8WWY3 499 aaKnown RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 EDEM1Q92611 657 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 GSDMAQ96QA5 445 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 SEZ6LQ9BYH1 1024 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 OSBPL7Q9BZF2 842 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 LRRC27Q9C0I9 530 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 GOLGA2P5Q9HBQ8 144 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 CBX8Q9HC52 389 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 SUCLA2Q9P2R7 463 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 HOOK1Q9UJC3 728 aaKnown RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 ZNF215Q9UL58 517 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 PCDHA11Q9Y5I1 949 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 SLC4A7Q9Y6M7 1214 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 ARID2Q68CP9 1835 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 ZMYM2Q9UBW7 1377 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 A0A087WZ62 844 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 C17orf102A2RUQ5 167 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 F8W735 103 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 K7ENM7 598 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 AP5Z1O43299 807 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 ZEB2O60315 1214 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 CABYRO75952 493 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 GCNT3O95395 438 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 CD4P01730 458 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 MYL1P05976 194 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 SRGAP2CP0DJJ0 459 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 CCDC192P0DO97 292 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 PLS3P13797 630 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 FSTP19883 344 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 FGFR4P22455 802 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 SSTR4P31391 388 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 CYP2C18P33260 490 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 NPTX2P47972 431 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 RABGGTBP53611 331 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 NCKAP1LP55160 1127 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 ADAM17P78536 824 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 LAMTOR4Q0VGL1 99 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 ITGA7Q13683 1181 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 NCAPHQ15003 741 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 IQCB1Q15051 598 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 BRDTQ58F21 947 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 ODR4Q5SWX8 454 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 PDE12Q6L8Q7 609 aaKnown RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 NFRKBQ6P4R8 1299 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 XKR5Q6UX68 686 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 EPM2AIP1Q7L775 607 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 ZNF720Q7Z2F6 126 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 RHPN2Q8IUC4 686 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 DHX40Q8IX18 779 aaKnown RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 FAM126BQ8IXS8 530 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 KIAA0319LQ8IZA0 1049 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 ADSSL1Q8N142 457 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 AOPEPQ8N6M6 819 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 C7orf31Q8N865 590 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 ZSWIM2Q8NEG5 633 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 MCPH1Q8NEM0 835 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 DNAJB3Q8WWF6 145 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 NELFBQ8WX92 580 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 SLC7A3Q8WY07 619 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 DHX38Q92620 1227 aaKnown RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 EEF2KMTQ96G04 330 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 CCDC34Q96HJ3 373 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 NLRP4Q96MN2 994 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 CTAGE1Q96RT6 745 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 DUSP9Q99956 384 aaKnown RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 FDXACB1Q9BRP7 624 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-244ENST00000556898 STRA6Q9BX79 667 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 TRPV6Q9H1D0 765 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 MINDY3Q9H8M7 445 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 AKTIPQ9H8T0 292 aa5.82□□□□□ -1.48
ATXN3-244ENST00000556898 MRPL44Q9H9J2 332 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms