RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 ADORA2AP29274 412 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 NSFP46459 744 aaKnown RBP10.81□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF132P52740 706 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 TFAMQ00059 246 aaKnown RBP10.81□□□□□ -0.68
TMEM260-211ENST00000556648 PTP4A2Q12974 167 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 MXD4Q14582 209 aaPredicted RBP10.81□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF792Q3KQV3 632 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF568Q3ZCX4 644 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 DNAJC21Q5F1R6 531 aaKnown RBP10.81□□□□□ -0.68
TMEM260-211ENST00000556648 KCTD16Q68DU8 428 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 SLC13A5Q86YT5 568 aaPredicted RBP10.81□□□□□ -0.68
TMEM260-211ENST00000556648 WDR49Q8IV35 697 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 ABRAQ8N0Z2 381 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 SHCBP1Q8NEM2 672 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 SLC10A4Q96EP9 437 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 RUFY1Q96T51 708 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 SMARCAD1Q9H4L7 1026 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 PTPRHQ9HD43 1115 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 POLIQ9UNA4 740 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 CNTN6Q9UQ52 1028 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 PPME1Q9Y570 386 aa10.81□□□□□ -0.68
TMEM260-211ENST00000556648 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 GOLGA8KD6RF30 607 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 GAS2O43903 313 aaKnown RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 HBP1O60381 514 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 LGALS2P05162 132 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 CXCL8P10145 99 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 CAPN2P17655 700 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF394Q53GI3 561 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ATF7IP2Q5U623 682 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 DUPD1Q68J44 220 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 MPZL3Q6UWV2 235 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 TSHZ1Q6ZSZ6 1077 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 MAATS1Q7Z4T9 603 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF677Q86XU0 584 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 GPRC5AQ8NFJ5 357 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 FAM76AQ8TAV0 307 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 MAGOHBQ96A72 148 aaKnown RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 FAM81BQ96LP2 452 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 NAP1L3Q99457 506 aaPredicted RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 CDT1Q9H211 546 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 FZD8Q9H461 694 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 AVENQ9NQS1 362 aaPredicted RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 SNX24Q9Y343 169 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 UTP11Q9Y3A2 253 aaKnown RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 GLTPD2A6NH11 291 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ASB14A6NK59 587 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 GPR25O00155 361 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 OPA1O60313 960 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 INSRRP14616 1297 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 TBXAS1P24557 533 aaPredicted RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ADCYAP1R1P41586 468 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 RAP1GAPP47736 663 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 KCNJ1P48048 391 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 RWDD2BP57060 319 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 TAS2R40P59535 323 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 BPIFB4P59827 614 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 TMEM132AQ24JP5 1023 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 UBAP2Q5T6F2 1119 aaKnown RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 FOXR1Q6PIV2 292 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ZDHHC24Q6UX98 284 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 TMC3Q7Z5M5 1100 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 GOLGA6L1Q8N7Z2 621 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 EIF1ADQ8N9N8 165 aaKnown RBP10.8□□□□□ -0.68
TMEM260-211ENST00000556648 AFG1LQ8WV93 481 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 C2orf40Q9H1Z8 148 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 ZDHHC18Q9NUE0 388 aa10.8□□□□□ -0.68
TMEM260-211ENST00000556648 CCL15-CCL14A0A0B4J2E2 113 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 FAM187AA6NFU0 413 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 H0YGN5 161 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ACKR2O00590 384 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 NFICP08651 508 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 WEE2P0C1S8 567 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ASPAP45381 313 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 GRM1Q13255 1194 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 MAMLD1Q13495 774 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CCL15Q16663 113 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 TTC19Q6DKK2 380 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ANKS1BQ7Z6G8 1248 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 C1orf131Q8NDD1 294 aaKnown RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 PPP1R13LQ8WUF5 828 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 TFAP2BQ92481 460 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CPB2Q96IY4 423 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ERP44Q9BS26 406 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 NIF3L1Q9GZT8 377 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 KATNBL1Q9H079 304 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 XYLT2Q9H1B5 865 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 FAM114A2Q9NRY5 505 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CISHQ9NSE2 258 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 GRHL1Q9NZI5 618 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ADAM22Q9P0K1 906 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 PNMA3Q9UL41 463 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 NFS1Q9Y697 457 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 SCN4AP35499 1836 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 A0A087WZ62 844 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms