RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 VAMP7P51809 220 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 SMC1AQ14683 1233 aaKnown RBP21.37■■□□□ 1.01
PNN-205ENST00000556530 SCARA3Q6AZY7 606 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 DSTYKQ6XUX3 929 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 RBM23Q86U06 439 aaKnown RBP21.37■■□□□ 1.01
PNN-205ENST00000556530 C1orf127Q8N9H9 656 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 PARD3BQ8TEW8 1205 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 ZNF516Q92618 1163 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 SRRTQ9BXP5 876 aaKnown RBP21.37■■□□□ 1.01
PNN-205ENST00000556530 MMRN2Q9H8L6 949 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 MYO7AQ13402 2215 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 ATG2AQ2TAZ0 1938 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 CHD9Q3L8U1 2897 aa21.37■■□□□ 1.01
PNN-205ENST00000556530 PRRC2BQ5JSZ5 2229 aaKnown RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 PIRO00625 290 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 MAPK13O15264 365 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 PHACTR2O75167 634 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 URODP06132 367 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 TRIM49P0CI25 452 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 TRIM49CP0CI26 452 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 CTSAP10619 480 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 POU3F3P20264 500 aaPredicted RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 ELAVL2Q12926 359 aaKnown RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 NFKBIBQ15653 356 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 TPD52L1Q16890 204 aaPredicted RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 SKOR2Q2VWA4 1001 aaPredicted RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 USP41Q3LFD5 358 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 CCDC40Q4G0X9 1142 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 TIGD5Q53EQ6 642 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 TCEAL5Q5H9L2 206 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 PDE12Q6L8Q7 609 aaKnown RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 INTS8Q75QN2 995 aaKnown RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 TMC2Q8TDI7 906 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 GZF1Q9H116 711 aaPredicted RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 NSUN3Q9H649 340 aaKnown RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 IGFLR1Q9H665 355 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 NGRNQ9NPE2 291 aaKnown RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 MRPL17Q9NRX2 175 aaKnown RBP21.36■■□□□ 1.01
PNN-205ENST00000556530 STK39Q9UEW8 545 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 ITGA11Q9UKX5 1188 aa21.36■■□□□ 1.01
PNN-205ENST00000556530 SCN1AP35498 2009 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.35■■□□□ 1.01
PNN-205ENST00000556530 ANO9A1A5B4 782 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 HIDE1A8MVS5 230 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 CLSTN1O94985 981 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 GLUD2P49448 558 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 RBP5P82980 135 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 BFSP1Q12934 665 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 BIRC3Q13489 604 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 TRAPPC11Q7Z392 1133 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 ADGRD2Q7Z7M1 963 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 USP37Q86T82 979 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 CREBRFQ8IUR6 639 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 ZC3H3Q8IXZ2 948 aaKnown RBP21.35■■□□□ 1.01
PNN-205ENST00000556530 RIN2Q8WYP3 895 aaPredicted RBP21.35■■□□□ 1.01
PNN-205ENST00000556530 CEP63Q96MT8 703 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 TTPALQ9BTX7 342 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 MKNK1Q9BUB5 465 aa21.35■■□□□ 1.01
PNN-205ENST00000556530 PER2O15055 1255 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 SLC16A3O15427 465 aaKnown RBP21.34■■□□□ 1.01
PNN-205ENST00000556530 EFEMP2O95967 443 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 TKTP29401 623 aaKnown RBP21.34■■□□□ 1.01
PNN-205ENST00000556530 TAF6P49848 677 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 LILRA4P59901 499 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 SKIV2LQ15477 1246 aaKnown RBP21.34■■□□□ 1.01
PNN-205ENST00000556530 STX1AQ16623 288 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 DCAF17Q5H9S7 520 aaPredicted RBP21.34■■□□□ 1.01
PNN-205ENST00000556530 TCERG1LQ5VWI1 586 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 PRSS55Q6UWB4 352 aaPredicted RBP21.34■■□□□ 1.01
PNN-205ENST00000556530 FILIP1Q7Z7B0 1213 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 RNF168Q8IYW5 571 aaPredicted RBP21.34■■□□□ 1.01
PNN-205ENST00000556530 MRPL43Q8N983 215 aaKnown RBP21.34■■□□□ 1.01
PNN-205ENST00000556530 ZNF560Q96MR9 790 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 TLE6Q9H808 572 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 ANO10Q9NW15 660 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 SIX4Q9UIU6 781 aa21.34■■□□□ 1.01
PNN-205ENST00000556530 C2orf71A6NGG8 1288 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 SPTLC1O15269 473 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 FGFR1OPO95684 399 aaKnown RBP21.33■■□□□ 1.01
PNN-205ENST00000556530 NRIP1P48552 1158 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 TRPC3Q13507 836 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 PTPN14Q15678 1187 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 RTP2Q5QGT7 225 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 KIAA0319Q5VV43 1072 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.33■■□□□ 1.01
PNN-205ENST00000556530 MAFAQ8NHW3 353 aaPredicted RBP21.33■■□□□ 1.01
PNN-205ENST00000556530 PPP2R3CQ969Q6 453 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 SUSD3Q96L08 255 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 MED15Q96RN5 788 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 CHST7Q9NS84 486 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 ARMCX3Q9UH62 379 aaPredicted RBP21.33■■□□□ 1.01
PNN-205ENST00000556530 SSX2IPQ9Y2D8 614 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 STXBP5LQ9Y2K9 1186 aa21.33■■□□□ 1.01
PNN-205ENST00000556530 TIMM13Q9Y5L4 95 aaPredicted RBP21.33■■□□□ 1.01
PNN-205ENST00000556530 CHD7Q9P2D1 2997 aa21.32■■□□□ 1
PNN-205ENST00000556530 CST3P01034 146 aaPredicted RBP21.32■■□□□ 1
PNN-205ENST00000556530 C4BPAP04003 597 aaKnown RBP21.32■■□□□ 1
PNN-205ENST00000556530 FGFR3P22607 806 aa21.32■■□□□ 1
PNN-205ENST00000556530 ERCC5P28715 1186 aaPredicted RBP21.32■■□□□ 1
PNN-205ENST00000556530 GTF2F1P35269 517 aaKnown RBP eCLIP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms