RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 SOD2P04179 222 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 ITGB3P05106 788 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 TMEM191BP0C7N4 346 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 PSMC2P35998 433 aaKnown RBP14.17□□□□□ -0.14
SRSF5-214ENST00000556436 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
SRSF5-214ENST00000556436 FKBP3Q00688 224 aaKnown RBP14.17□□□□□ -0.14
SRSF5-214ENST00000556436 SURF1Q15526 300 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 PTPN14Q15678 1187 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 PTPROQ16827 1216 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 TIGD5Q53EQ6 642 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 TCEAL5Q5H9L2 206 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 RTP2Q5QGT7 225 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 FOXR2Q6PJQ5 311 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 C11orf57Q6ZUT1 292 aaPredicted RBP14.17□□□□□ -0.14
SRSF5-214ENST00000556436 FNBP1Q96RU3 617 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 MKNK1Q9BUB5 465 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 LMCD1Q9NZU5 365 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 PUF60Q9UHX1 559 aaKnown RBP14.17□□□□□ -0.14
SRSF5-214ENST00000556436 RWDD2AQ9UIY3 292 aa14.17□□□□□ -0.14
SRSF5-214ENST00000556436 BICDL2A1A5D9 508 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 TNNC2P02585 160 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 CTSAP10619 480 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 EPB41P11171 864 aaKnown RBP14.16□□□□□ -0.14
SRSF5-214ENST00000556436 TNNI1P19237 187 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 PTMSP20962 102 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 TKTP29401 623 aaKnown RBP14.16□□□□□ -0.14
SRSF5-214ENST00000556436 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
SRSF5-214ENST00000556436 GLUD2P49448 558 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 VAMP7P51809 220 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 CLDN10P78369 228 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 BFSP1Q12934 665 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 NFKBIBQ15653 356 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 DUOXA2Q1HG44 320 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 TDRD10Q5VZ19 366 aaKnown RBP14.16□□□□□ -0.14
SRSF5-214ENST00000556436 TMC7Q7Z402 723 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 TMC2Q8TDI7 906 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 ANKRD36BP1Q96IX9 119 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 CEP63Q96MT8 703 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 NSUN3Q9H649 340 aaKnown RBP14.16□□□□□ -0.14
SRSF5-214ENST00000556436 CHST7Q9NS84 486 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 ITGA11Q9UKX5 1188 aa14.16□□□□□ -0.14
SRSF5-214ENST00000556436 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.16□□□□□ -0.14
SRSF5-214ENST00000556436 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 C2orf71A6NGG8 1288 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 C2CD2LO14523 706 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 LILRB3O75022 631 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 URODP06132 367 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 FGFR3P22607 806 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 LILRA4P59901 499 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 DSG1Q02413 1049 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 TYRO3Q06418 890 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 PPP3CAQ08209 521 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 SMC1AQ14683 1233 aaKnown RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 CCDC85BQ15834 202 aaPredicted RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 STX1AQ16623 288 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 FAM171A1Q5VUB5 890 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 KIAA0319Q5VV43 1072 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 PRSS55Q6UWB4 352 aaPredicted RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 INTS8Q75QN2 995 aaKnown RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 TRAPPC11Q7Z392 1133 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 CACTINQ8WUQ7 758 aaKnown RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 SYAP1Q96A49 352 aaPredicted RBP14.15□□□□□ -0.14
SRSF5-214ENST00000556436 SUSD3Q96L08 255 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 AGAP1Q9UPQ3 857 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 STXBP5LQ9Y2K9 1186 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 NUB1Q9Y5A7 615 aa14.15□□□□□ -0.14
SRSF5-214ENST00000556436 XIRP2A4UGR9 3374 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 M0QZQ0 153 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 VNN1O95497 513 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 C4BPAP04003 597 aaKnown RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 KRT19P08727 400 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 RPL17P18621 184 aaKnown RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 CA8P35219 290 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 TAF6P49848 677 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 HYAL1Q12794 435 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 ELAVL2Q12926 359 aaKnown RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 USP41Q3LFD5 358 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 ZACNQ401N2 412 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 SASS6Q6UVJ0 657 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 C15orf39Q6ZRI6 1047 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 CEP57Q86XR8 500 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 LRRC52Q8N7C0 313 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 MRPL43Q8N983 215 aaKnown RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 MAFAQ8NHW3 353 aaPredicted RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 MICAL1Q8TDZ2 1067 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 RIN2Q8WYP3 895 aaPredicted RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 ELMO3Q96BJ8 720 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 TTPALQ9BTX7 342 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 FUCA2Q9BTY2 467 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 MMRN2Q9H8L6 949 aa14.14□□□□□ -0.15
SRSF5-214ENST00000556436 NGRNQ9NPE2 291 aaKnown RBP14.14□□□□□ -0.15
SRSF5-214ENST00000556436 PER2O15055 1255 aa14.13□□□□□ -0.15
SRSF5-214ENST00000556436 CXCL14O95715 111 aa14.13□□□□□ -0.15
SRSF5-214ENST00000556436 CST3P01034 146 aaPredicted RBP14.13□□□□□ -0.15
SRSF5-214ENST00000556436 CNPP09543 421 aaKnown RBP14.13□□□□□ -0.15
SRSF5-214ENST00000556436 KRT13P13646 458 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms