RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 NUP88Q99567 741 aaPredicted RBP4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 C1orf43Q9BWL3 253 aa4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 SLC46A2Q9BY10 475 aa4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 PACSIN1Q9BY11 444 aa4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 IKZF4Q9H2S9 585 aa4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 CALCOCO1Q9P1Z2 691 aa4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 TNFRSF18Q9Y5U5 241 aa4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 NR2E3Q9Y5X4 410 aa4.66□□□□□ -1.66
SUPT16H-206ENST00000556309 A0A1B0GTW7 788 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 UNC119BA6NIH7 251 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 HAUS5O94927 633 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 MTHFD1P11586 935 aaKnown RBP4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 CKBP12277 381 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 FCER1AP12319 257 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 FGFR4P22455 802 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 GCSHP23434 173 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 HK3P52790 923 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 HSD11B2P80365 405 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 SLFN5Q08AF3 891 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 ATAT1Q5SQI0 421 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 LRCH2Q5VUJ6 765 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 LRRC55Q6ZSA7 311 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 EPM2AIP1Q7L775 607 aaPredicted RBP4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 MAPKAPK5Q8IW41 473 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 RHOT2Q8IXI1 618 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 CAMKK1Q8N5S9 505 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 ZNF483Q8TF39 744 aaPredicted RBP4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 CGRRF1Q99675 332 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 PRRX2Q99811 253 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 MLST8Q9BVC4 326 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 TLR10Q9BXR5 811 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 ARMT1Q9H993 441 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 LMBRD1Q9NUN5 540 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 ANKFY1Q9P2R3 1169 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 TCEAL9Q9UHQ7 104 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 PCDHA1Q9Y5I3 950 aa4.65□□□□□ -1.67
SUPT16H-206ENST00000556309 NT5C1B-RDH14C9J2C7 533 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 DIRC3C9JPN6 131 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 H3BUI4 141 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 SLC43A1O75387 559 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 RFPL1O75677 317 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 SPATA31D3P0C874 917 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 HSPA6P17066 643 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 LPOP22079 712 aaPredicted RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 PSMC1P62191 440 aaKnown RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 OCA2Q04671 838 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 RESTQ13127 1097 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 TIGD2Q4W5G0 525 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 CCDC93Q567U6 631 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 B3GNT9Q6UX72 402 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 SPATA31D4Q6ZUB0 917 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 MRGPREQ86SM8 312 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 SLC17A8Q8NDX2 589 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 NSUN7Q8NE18 718 aaKnown RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 CPEB3Q8NE35 698 aaKnown RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 TMIEQ8NEW7 156 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 IL17RDQ8NFM7 739 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 NLGN4YQ8NFZ3 816 aaPredicted RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 SLC35G2Q8TBE7 412 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 PROKR1Q8TCW9 393 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 DIS3LQ8TF46 1054 aaKnown RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 HAS1Q92839 578 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 ACO2Q99798 780 aaKnown RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 REXO4Q9GZR2 422 aaKnown RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 KMT5AQ9NQR1 393 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 MAN1C1Q9NR34 630 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 VSX1Q9NZR4 365 aaPredicted RBP4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 FAM30AQ9NZY2 134 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 HSFX1Q9UBD0 423 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 POLHQ9Y253 713 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 FPGT-TNNI3KV9GXZ4 949 aa4.64□□□□□ -1.67
SUPT16H-206ENST00000556309 CENPVL1A0A0U1RR11 272 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 TSPAN6O43657 245 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 GPANK1O95872 356 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 AHSGP02765 367 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 ADH4P08319 380 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 LAG3P18627 525 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 PRDX5P30044 214 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 PTGS2P35354 604 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 HNRNPA0Q13151 305 aaKnown RBP4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 BEAN1Q3B7T3 259 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 FAM102BQ5T8I3 360 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 THEMIS2Q5TEJ8 643 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 B3GNTL1Q67FW5 361 aaPredicted RBP4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 DPY19L2P1Q6NXN4 242 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 KCNV1Q6PIU1 500 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 ZNF627Q7L945 461 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 PPP1R3BQ86XI6 285 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 COL23A1Q86Y22 540 aaPredicted RBP4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 SYNE4Q8N205 404 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 TMEM132CQ8N3T6 1108 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 CELF5Q8N6W0 485 aaKnown RBP4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 PLBD2Q8NHP8 589 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 NEU4Q8WWR8 484 aaPredicted RBP4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 LARP4BQ92615 738 aaKnown RBP4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 TNPO1Q92973 898 aaKnown RBP4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 VOPP1Q96AW1 172 aa4.63□□□□□ -1.67
SUPT16H-206ENST00000556309 RNF31Q96EP0 1072 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms