RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TRAIPQ9BWF2 469 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 LACRTQ9GZZ8 138 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 NT5C3AQ9H0P0 336 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 RASSF4Q9H2L5 321 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 AGO4Q9HCK5 861 aaKnown RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 LTB4R2Q9NPC1 389 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 ZNF302Q9NR11 478 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 PRMT8Q9NR22 394 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 CHST12Q9NRB3 414 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 TBC1D13Q9NVG8 400 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 RAB23Q9ULC3 237 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 AKT3Q9Y243 479 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 ZFP37Q9Y6Q3 630 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 LOXHD1Q8IVV2 1947 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 LAMA5O15230 3695 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 IFIT3O14879 490 aaKnown RBP7.74□□□□□ -1.17
ATXN3-236ENST00000556220 NCAM2O15394 837 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 TEX28O15482 410 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 OFD1O75665 1012 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 CCNE2O96020 404 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 GLUD1P00367 558 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SOD2P04179 222 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 ALDH2P05091 517 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 MYBP10242 640 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 CD72P21854 359 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 FGFR4P22455 802 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 TMOD1P28289 359 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SMARCA1P28370 1054 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 RPS9P46781 194 aaKnown RBP7.74□□□□□ -1.17
ATXN3-236ENST00000556220 CLCN3P51790 818 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 AK2P54819 239 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 RNASELQ05823 741 aaKnown RBP7.74□□□□□ -1.17
ATXN3-236ENST00000556220 CSRP2Q16527 193 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 LPAL2Q16609 132 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 CEP55Q53EZ4 464 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 ANKRD45Q5TZF3 282 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 LAIR1Q6GTX8 287 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SWSAP1Q6NVH7 229 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 EFCAB12Q6NXP0 572 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 PARM1Q6UWI2 310 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 GLB1LQ6UWU2 654 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 CATIPQ7Z7H3 387 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 AGGF1Q8N302 714 aaeCLIP7.74□□□□□ -1.17
ATXN3-236ENST00000556220 LINC01465Q8N7H1 131 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 FGF14Q92915 247 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 LPPQ93052 612 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 RILPL2Q969X0 211 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 RPS6KC1Q96S38 1066 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 MAP7D2Q96T17 732 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 NELL2Q99435 816 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SPZ1Q9BXG8 430 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 CEP41Q9BYV8 373 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 PLEKHA4Q9H4M7 779 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 PIDD1Q9HB75 910 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SEMA4GQ9NTN9 838 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 DNAJB4Q9UDY4 337 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SEC63Q9UGP8 760 aaKnown RBP7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SSX2IPQ9Y2D8 614 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 RAXQ9Y2V3 346 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 SPEGQ15772 3267 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 IGF2RP11717 2491 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 DOCK8Q8NF50 2099 aa7.74□□□□□ -1.17
ATXN3-236ENST00000556220 DENND4AQ7Z401 1863 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 MEIS1O00470 390 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 TM4SF5O14894 197 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 GSC2O15499 205 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 GAS2O43903 313 aaKnown RBP7.73□□□□□ -1.17
ATXN3-236ENST00000556220 C1RP00736 705 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 CENPBP07199 599 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-236ENST00000556220 TDGF1P13385 188 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 KIF5BP33176 963 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 GPC3P51654 580 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 PFKPQ01813 784 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 FZD5Q13467 585 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 UBE2SQ16763 222 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 LONRF3Q496Y0 759 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 MIS18BP1Q6P0N0 1132 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 CWC27Q6UX04 472 aaKnown RBP7.73□□□□□ -1.17
ATXN3-236ENST00000556220 XKR5Q6UX68 686 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 GET4Q7L5D6 327 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-236ENST00000556220 TAS1R1Q7RTX1 841 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 CKAP2LQ8IYA6 745 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 PHKBQ93100 1093 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 ZNF668Q96K58 619 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-236ENST00000556220 UBL7Q96S82 380 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-236ENST00000556220 MAP3K14Q99558 947 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 LZTS2Q9BRK4 669 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 MYL10Q9BUA6 226 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 ADAM19Q9H013 955 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 GBP3Q9H0R5 595 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 RXFP1Q9HBX9 757 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 ZDHHC7Q9NXF8 308 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 CDH7Q9ULB5 785 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 CEP131Q9UPN4 1083 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 INPP5FQ9Y2H2 1132 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 FAN1Q9Y2M0 1017 aa7.73□□□□□ -1.17
ATXN3-236ENST00000556220 ERICH2A1L162 156 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 MEIS3P2A8K0S8 358 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 DDX39AO00148 427 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms