RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GCLMP48507 274 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 TAF6P49848 677 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 MXI1P50539 228 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 CLCNKBP51801 687 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 WNT7BP56706 349 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 PLCB3Q01970 1234 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 SOX4Q06945 474 aaPredicted RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 GPM6BQ13491 265 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 MAN2A1Q16706 1144 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 PTPROQ16827 1216 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 UPP1Q16831 310 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 ZACNQ401N2 412 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 SV2CQ496J9 727 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 HABP4Q5JVS0 413 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 C9orf57Q5W0N0 161 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 LMBRD2Q68DH5 695 aaPredicted RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 PDE12Q6L8Q7 609 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 KIAA1841Q6NSI8 718 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 GPR153Q6NV75 609 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 DSTYKQ6XUX3 929 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 SV2AQ7L0J3 742 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 TRIM59Q8IWR1 403 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 C1orf127Q8N9H9 656 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 KLHL23Q8NBE8 558 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 OR5B17Q8NGF7 314 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 ARNTL2Q8WYA1 636 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 TAF4BQ92750 862 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 SLC35C1Q96A29 364 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 IGSF21Q96ID5 467 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 POP1Q99575 1024 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 C17orf80Q9BSJ5 609 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 LMAN2LQ9H0V9 348 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 CXCL16Q9H2A7 254 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 ZNF576Q9H609 170 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 MMRN2Q9H8L6 949 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 GOLGA2P5Q9HBQ8 144 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 CBX8Q9HC52 389 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 SAMSN1Q9NSI8 373 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 FANCLQ9NW38 375 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 ADAM28Q9UKQ2 775 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 MTUS1Q9ULD2 1270 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 AGAP1Q9UPQ3 857 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 LZTS1Q9Y250 596 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 SSX2IPQ9Y2D8 614 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 SCN1AP35498 2009 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 NT5C1B-RDH14C9J2C7 533 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 H3BNC9 293 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 PES1O00541 588 aaKnown RBP8.22□□□□□ -1.09
TDP1-214ENST00000556063 PIRO00625 290 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 SYN3O14994 580 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 PMM2O15305 246 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 KIF4AO95239 1232 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 FMO5P49326 533 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 GUCY2FP51841 1108 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 DLG4P78352 724 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 MYL7Q01449 175 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 PPP3CAQ08209 521 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 KCNH2Q12809 1159 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 NCOA4Q13772 614 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 NCAPHQ15003 741 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 IQCB1Q15051 598 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 SGSM1Q2NKQ1 1148 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 FILIP1LQ4L180 1135 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 TCP11X2Q5H9J9 407 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 FKBP15Q5T1M5 1219 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 CDKAL1Q5VV42 579 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 TDRD10Q5VZ19 366 aaKnown RBP8.22□□□□□ -1.09
TDP1-214ENST00000556063 FUT10Q6P4F1 479 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 PDXDC1Q6P996 788 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 DDX53Q86TM3 631 aaKnown RBP8.22□□□□□ -1.09
TDP1-214ENST00000556063 METTL23Q86XA0 190 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 IRF2BP1Q8IU81 584 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 DHX40Q8IX18 779 aaKnown RBP8.22□□□□□ -1.09
TDP1-214ENST00000556063 GPR65Q8IYL9 337 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 FBXL13Q8NEE6 735 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 APPL2Q8NEU8 664 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 SPDYE1Q8NFV5 336 aaPredicted RBP8.22□□□□□ -1.09
TDP1-214ENST00000556063 PLEKHO2Q8TD55 490 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 ZNF516Q92618 1163 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 PPP2R3CQ969Q6 453 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 HPDLQ96IR7 371 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 TUBGCP2Q9BSJ2 902 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 DNAI2Q9GZS0 605 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 HCSTQ9UBK5 93 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 DSEQ9UL01 958 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 PTPRJQ12913 1337 aa8.22□□□□□ -1.09
TDP1-214ENST00000556063 GTPBP10A4D1E9 387 aaKnown RBP8.21□□□□□ -1.1
TDP1-214ENST00000556063 KPNA7A9QM74 516 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 B4GALT3O60512 393 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 HUS1O60921 280 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.1
TDP1-214ENST00000556063 HLA-DRAP01903 254 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 SOD2P04179 222 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 ITGB1P05556 798 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 URODP06132 367 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 FAM163BP0C2L3 166 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 LINC00271P0C7V0 271 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 ODC1P11926 461 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 ZNF18P17022 549 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms