RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 OVOL3O00110 214 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 CYP2B6P20813 491 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 FGFR2P21802 821 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 RGS3P49796 1198 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 HERVK_113P62684 666 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 LRRC26Q2I0M4 334 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 LRRC24Q50LG9 513 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 FIGNQ5HY92 759 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 C16orf59Q7L2K0 433 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 FUKQ8N0W3 1084 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 VGLL2Q8N8G2 317 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 SH3RF2Q8TEC5 729 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 FBXW5Q969U6 566 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 KAZALD1Q96I82 304 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 IPO9Q96P70 1041 aaKnown RBP6.01□□□□□ -1.45
ATXN3-233ENST00000555816 GNL3LQ9NVN8 582 aaKnown RBP6.01□□□□□ -1.45
ATXN3-233ENST00000555816 AURKAIP1Q9NWT8 199 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-233ENST00000555816 GALNT8Q9NY28 637 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 ARHGAP28Q9P2N2 729 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 ATP23Q9Y6H3 246 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 LAMB1P07942 1786 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 IL16Q14005 1332 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 TLDC2A0PJX2 215 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 PMS2P1A4D2B8 440 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 PDPK1O15530 556 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 ZNF888P0CJ79 500 aaPredicted RBP6□□□□□ -1.45
ATXN3-233ENST00000555816 ABHD18Q0P651 414 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 SPP2Q13103 211 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 EIF4HQ15056 248 aaKnown RBP6□□□□□ -1.45
ATXN3-233ENST00000555816 PUM3Q15397 648 aaKnown RBP6□□□□□ -1.45
ATXN3-233ENST00000555816 STILQ15468 1287 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 RABL6Q3YEC7 729 aaPredicted RBP6□□□□□ -1.45
ATXN3-233ENST00000555816 NRN1LQ496H8 165 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 MAMDC4Q6UXC1 1216 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 ARHGAP36Q6ZRI8 547 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 JAZF1Q86VZ6 243 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 GPRC5AQ8NFJ5 357 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 TRIB2Q92519 343 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 LPIN2Q92539 896 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 SPATA9Q9BWV2 254 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 SENP6Q9GZR1 1112 aaPredicted RBP6□□□□□ -1.45
ATXN3-233ENST00000555816 NELFAQ9H3P2 528 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 SLC39A2Q9NP94 309 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 MORF4L1Q9UBU8 362 aa6□□□□□ -1.45
ATXN3-233ENST00000555816 ATRNL1Q5VV63 1379 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 DDTLA6NHG4 134 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 NBPF7P0C2Y1 421 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 SLC5A1P13866 664 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 ZKSCAN1P17029 563 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 PRDX5P30044 214 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 MAPK4P31152 587 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 HOXA7P31268 230 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 MCM7P33993 719 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 RGS2P41220 211 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 SUMO1P63165 101 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 SMAD3P84022 425 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 DDX10Q13206 875 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 RASGRF1Q13972 1273 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 SHHQ15465 462 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 RNF151Q2KHN1 245 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 WDR72Q3MJ13 1102 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 USP39Q53GS9 565 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 SLC4A10Q6U841 1118 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 Q6ZSN1 163 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 CCAR1Q8IX12 1150 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 SOCS4Q8WXH5 440 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 USP6NLQ92738 828 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 P2RX7Q99572 595 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 BTBD2Q9BX70 525 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 CD244Q9BZW8 370 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 OSBPL5Q9H0X9 879 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 INCENPQ9NQS7 918 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 CATSPERZQ9NTU4 200 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 RIC8BQ9NVN3 520 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 PUF60Q9UHX1 559 aaKnown RBP5.99□□□□□ -1.45
ATXN3-233ENST00000555816 DENND2AQ9ULE3 1009 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 NR2E1Q9Y466 385 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 UTYO14607 1347 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 SALL1Q9NSC2 1324 aa5.99□□□□□ -1.45
ATXN3-233ENST00000555816 TCRBV5S4A2TA0A5A2 114 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 FAM90A27PA6NNH2 459 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 NPIPB8E9PQR5 432 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 EYA2O00167 538 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 ARHGAP6O43182 974 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 CDC14BO60729 498 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 CLASP2O75122 1294 aaKnown RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 FOSL2P15408 326 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 ACO1P21399 889 aaKnown RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 PTGS1P23219 599 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 CCND3P30281 292 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 HMGCS2P54868 508 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 IRX3P78415 501 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 EXOSC9Q06265 439 aaKnown RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 KLF10Q13118 480 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 FHL2Q14192 279 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms