RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 VRTNQ9H8Y1 702 aa13.43□□□□□ -0.26
SHMT2-221ENST00000555773 A0A1W2PQC6 194 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 CASTOR2A6NHX0 329 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 NRP1O14786 923 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 B3GAT3O94766 335 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 PIK3CAP42336 1068 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 CLCNKBP51801 687 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 BCAR1P56945 870 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 GSE1Q14687 1217 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 EPC2Q52LR7 807 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 SPOUT1Q5T280 376 aaKnown RBP13.42□□□□□ -0.26
SHMT2-221ENST00000555773 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 CLP1Q92989 425 aaKnown RBP13.42□□□□□ -0.26
SHMT2-221ENST00000555773 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 ZNF560Q96MR9 790 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 ZNF558Q96NG5 402 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 ERGIC2Q96RQ1 377 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 GOLGA2P5Q9HBQ8 144 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 IFNKQ9P0W0 207 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 DNAJB4Q9UDY4 337 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 MSRAQ9UJ68 235 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 RWDD3Q9Y3V2 267 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 MRPL42Q9Y6G3 142 aaKnown RBP13.42□□□□□ -0.26
SHMT2-221ENST00000555773 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
SHMT2-221ENST00000555773 TRAPPC3O43617 180 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 TADA2AO75478 443 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
SHMT2-221ENST00000555773 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 SLC11A1P49279 550 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 TAF6P49848 677 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 LILRA4P59901 499 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 MYL6P60660 151 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 RAB30Q15771 203 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 SV2CQ496J9 727 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 SMYD5Q6GMV2 418 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 KCNT2Q6UVM3 1135 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 SEMA4DQ92854 862 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 FAM84AQ96KN4 292 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 FAM81BQ96LP2 452 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 CRACR2AQ9BSW2 395 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 TRIM5Q9C035 493 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 XPO4Q9C0E2 1151 aaKnown RBP13.41□□□□□ -0.26
SHMT2-221ENST00000555773 XYLT2Q9H1B5 865 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 STK39Q9UEW8 545 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 NUB1Q9Y5A7 615 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 PCDHB12Q9Y5F1 795 aa13.41□□□□□ -0.26
SHMT2-221ENST00000555773 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 GRXCR1A8MXD5 290 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 KPNA7A9QM74 516 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 TEX33O43247 280 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 B4GALT3O60512 393 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 P4HA1P13674 534 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 PON1P27169 355 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 PPM1AP35813 382 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHMT2-221ENST00000555773 MRE11P49959 708 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 RABGGTBP53611 331 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
SHMT2-221ENST00000555773 KCNMA1Q12791 1236 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
SHMT2-221ENST00000555773 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 FAM109BQ6ICB4 259 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-221ENST00000555773 DPH6Q7L8W6 267 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 SAMD11Q96NU1 681 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 NT5C1BQ96P26 610 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 PAAF1Q9BRP4 392 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 PLVAPQ9BX97 442 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 INTS2Q9H0H0 1204 aaKnown RBP13.4□□□□□ -0.26
SHMT2-221ENST00000555773 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 PLCB1Q9NQ66 1216 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 GDAP2Q9NXN4 497 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 DAAM1Q9Y4D1 1078 aa13.4□□□□□ -0.26
SHMT2-221ENST00000555773 LINC01553A4QN01 128 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 PPEF2O14830 753 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 RB1P06400 928 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 SLC9A1P19634 815 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 BMPR1AP36894 532 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 SYCP1Q15431 976 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 WDR72Q3MJ13 1102 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 ZNF667Q5HYK9 610 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 TRIM65Q6PJ69 517 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 CD300LGQ6UXG3 332 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 SLC39A11Q8N1S5 342 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 IQCDQ96DY2 449 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 IGSF21Q96ID5 467 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 FAM124BQ9H5Z6 455 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-221ENST00000555773 CYP3A43Q9HB55 503 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 ADAM28Q9UKQ2 775 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 SIK3Q9Y2K2 1263 aa13.39□□□□□ -0.27
SHMT2-221ENST00000555773 PRG3Q9Y2Y8 225 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-221ENST00000555773 LCHNA4D1U4 455 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms