RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SARGQ9BW04 601 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 B3GNT5Q9BYG0 378 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 C11orf54Q9H0W9 315 aaPredicted RBP4.26□□□□□ -1.73
SRP54-209ENST00000555746 CD248Q9HCU0 757 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 LMBRD1Q9NUN5 540 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 PNPOQ9NVS9 261 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 L1RE1Q9UN81 338 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 JAG2Q9Y219 1238 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 PCDHA3Q9Y5H8 950 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 VWDEQ8N2E2 1590 aa4.26□□□□□ -1.73
SRP54-209ENST00000555746 SPATA31A6Q5VVP1 1343 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 PNPLA7Q6ZV29 1317 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 DENND4BO75064 1496 aaPredicted RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 BCL9LQ86UU0 1499 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 ABCA9Q8IUA7 1624 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 ARID1BQ8NFD5 2236 aaPredicted RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 CCDC194A0A1B0GVG4 234 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 F2RL2O00254 374 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 AMHP03971 560 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 MTHFD1P11586 935 aaKnown RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 TRIM27P14373 513 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 RHCEP18577 417 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 GNAT2P19087 354 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 COMTP21964 271 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 PRDX5P30044 214 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 RAB1AP62820 205 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 GPSM2P81274 684 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 RHDQ02161 417 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 NPATQ14207 1427 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 ELAVL1Q15717 326 aaKnown RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 CSRP2Q16527 193 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 SPTY2D1Q68D10 685 aaPredicted RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 NAIF1Q69YI7 327 aaPredicted RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 DAAM2Q86T65 1068 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 FAM90A1Q86YD7 464 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 ANKRD35Q8N283 1001 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 ZFP28Q8NHY6 868 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 CXorf38Q8TB03 319 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 TIFAQ96CG3 184 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 NDC1Q9BTX1 674 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 EPC1Q9H2F5 836 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 ARNT2Q9HBZ2 717 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 ABCF2Q9UG63 623 aa4.25□□□□□ -1.73
SRP54-209ENST00000555746 FEZ2Q9UHY8 353 aaPredicted RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 ZNF142P52746 1687 aaPredicted RBP4.25□□□□□ -1.73
SRP54-209ENST00000555746 ATP10AO60312 1499 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 CAPN8A6NHC0 703 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 PRR5-ARHGAP8B1AHC4 643 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 GRM6O15303 877 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 FRS3O43559 492 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 ZNF623O75123 536 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 KRT18P05783 430 aaKnown RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 MYL1P05976 194 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 CD1AP06126 327 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 MYBP10242 640 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 PHKG2P15735 406 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 RABGGTBP53611 331 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 FAM193AP78312 1265 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 CREMQ03060 361 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 FZD5Q13467 585 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 FGL2Q14314 439 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 PLS1Q14651 629 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 ICAM4Q14773 271 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 NFIXQ14938 502 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 VPS72Q15906 364 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 FLYWCH1Q4VC44 716 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 FBLN7Q53RD9 439 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 MEX3CQ5U5Q3 659 aaKnown RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 C1QL3Q5VWW1 255 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 MAEAQ7L5Y9 396 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 XYLT1Q86Y38 959 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 CCDC146Q8IYE0 955 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 ELOA2Q8IYF1 753 aaPredicted RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 TTC9BQ8N6N2 239 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 NLGN4YQ8NFZ3 816 aaPredicted RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 EDAQ92838 391 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 MTFMTQ96DP5 389 aaKnown RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 SLC35A4Q96G79 324 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 WWC2-AS2Q96NR7 200 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 MYOCQ99972 504 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 CPPED1Q9BRF8 314 aaPredicted RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 CPEB1Q9BZB8 566 aaKnown RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 HDAC5Q9UQL6 1122 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 RUVBL1Q9Y265 456 aaKnown RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 STRCP1A6NGW2 1772 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 LRP6O75581 1613 aa4.24□□□□□ -1.73
SRP54-209ENST00000555746 POLR1AO95602 1720 aaPredicted RBP4.24□□□□□ -1.73
SRP54-209ENST00000555746 CDK13Q14004 1512 aaKnown RBP4.23□□□□□ -1.73
SRP54-209ENST00000555746 H3BUI4 141 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 CYP27B1O15528 508 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 SLC43A1O75387 559 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 POMCP01189 267 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 SBK3P0C264 359 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 ALAS1P13196 640 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 MGAT1P26572 445 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 SMARCA1P28370 1054 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 SLC6A4P31645 630 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 CACNB3P54284 484 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 HHEXQ03014 270 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 SEMA5AQ13591 1074 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms