RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 BAP1Q92560 729 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 KREMEN1Q96MU8 473 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 CHORDC1Q9UHD1 332 aaPredicted RBP10.95□□□□□ -0.66
NEK9-205ENST00000555405 B3GAT3O94766 335 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 THP07101 528 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 ABCB4P21439 1286 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 DNA2P51530 1060 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 C2CD6Q53TS8 623 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 AGMOQ6ZNB7 445 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 PAAF1Q9BRP4 392 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 ASB7Q9H672 318 aa10.95□□□□□ -0.66
NEK9-205ENST00000555405 EPN1Q9Y6I3 576 aaPredicted RBP10.95□□□□□ -0.66
NEK9-205ENST00000555405 CA8P35219 290 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 OR1G1P47890 313 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SOX4Q06945 474 aaPredicted RBP10.94□□□□□ -0.66
NEK9-205ENST00000555405 HSP90AA2PQ14568 343 aaPredicted RBP10.94□□□□□ -0.66
NEK9-205ENST00000555405 WDR59Q6PJI9 974 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 TMTC1Q8IUR5 882 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 GLYCTKQ8IVS8 523 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 OR6B3Q8NGW1 331 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 JAKMIP2Q96AA8 810 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 ARHGAP20Q9P2F6 1191 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SIX4Q9UIU6 781 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 GUCA1BQ9UMX6 200 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 PCDHB7Q9Y5E2 793 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 ARL5CA6NH57 179 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 MAPK13O15264 365 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 RBP5P82980 135 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SGSM1Q2NKQ1 1148 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 GLB1LQ6UWU2 654 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 CCDC112Q8NEF3 446 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 LMO3Q8TAP4 145 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SLC20A1Q8WUM9 679 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SNX27Q96L92 541 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 PANX2Q96RD6 677 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 STK33Q9BYT3 514 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SMYD3Q9H7B4 428 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 ARHGAP6O43182 974 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■□□□□ 9.7
NEK9-205ENST00000555405 ITGB8P26012 769 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 CYLC1P35663 651 aaPredicted RBP10.94□□□□□ -0.66
NEK9-205ENST00000555405 SOX5P35711 763 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 PTK2Q05397 1052 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 ARHGAP29Q52LW3 1261 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 DSTYKQ6XUX3 929 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 CEP57Q86XR8 500 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 SLC43A3Q8NBI5 491 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 TTYH3Q9C0H2 523 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 WNT8AQ9H1J5 351 aa10.94□□□□□ -0.66
NEK9-205ENST00000555405 F8W810 466 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 THAP12O43422 761 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 HCRTO43612 131 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 MYO1EQ12965 1108 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 CUL2Q13617 745 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 CCDC122Q5T0U0 273 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEK9-205ENST00000555405 SLC24A5Q71RS6 500 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 ECHDC2Q86YB7 292 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 TRIM10Q9UDY6 481 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 UBQLN1Q9UMX0 589 aaKnown RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 A0A0U1RQF3 1178 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 MACROD2A1Z1Q3 448 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 GTPBP10A4D1E9 387 aaKnown RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 TBKBP1A7MCY6 615 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 F8VZ95 297 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 CD4P01730 458 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 LPIN3Q9BQK8 851 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 THSD7BQ9C0I4 1608 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 PIK3R2O00459 728 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 ENPP3O14638 875 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 P4HA2O15460 535 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 TNNT1P13805 278 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 GTF2H1P32780 548 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 MAGEA1P43355 309 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 CLCNKBP51801 687 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 KIF11P52732 1056 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 KYAT1Q16773 422 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 ZNF571Q7Z3V5 609 aaPredicted RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 SLC30A5Q8TAD4 765 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 CCDC51Q96ER9 411 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 HEXIM2Q96MH2 286 aaKnown RBP10.93□□□□□ -0.66
NEK9-205ENST00000555405 CHST12Q9NRB3 414 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 CISHQ9NSE2 258 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 PAXBP1Q9Y5B6 917 aa10.93□□□□□ -0.66
NEK9-205ENST00000555405 TRIP11Q15643 1979 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 PTGESO14684 152 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 XPOTO43592 962 aaKnown RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 NDUFA10O95299 355 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 ACAT1P24752 427 aaKnown RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 BRCC3P46736 316 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 TCTN1Q2MV58 587 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms