RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
TRAPPC6B-205ENST00000555269 EPHX3Q9H6B9 360 aa13.49□□□□□ -0.25
TRAPPC6B-205ENST00000555269 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
TRAPPC6B-205ENST00000555269 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
TRAPPC6B-205ENST00000555269 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
TRAPPC6B-205ENST00000555269 NUB1Q9Y5A7 615 aa13.49□□□□□ -0.25
TRAPPC6B-205ENST00000555269 BDP1A6H8Y1 2624 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 PVALEFA0A1B0GWK0 134 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 A0A1W2PQ27 194 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 A0A1W2PQ64 194 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 A0A1W2PQD8 194 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 CLIC2O15247 247 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 TRAPPC3O43617 180 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 RFPL2O75678 378 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 GLUD1P00367 558 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 OR1D2P34982 312 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ITIH3Q06033 890 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ALCAMQ13740 583 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 SPATA1Q5VX52 437 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 CES5AQ6NT32 575 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 CD302Q8IX05 232 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 NELFCDQ8IXH7 590 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 SCFD1Q8WVM8 642 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 PYM1Q9BRP8 204 aaKnown RBP13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 PHF7Q9BWX1 381 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 POMKQ9H5K3 350 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 TMEM206Q9H813 350 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 MAN1C1Q9NR34 630 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 DZANK1Q9NVP4 752 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 TIMM13Q9Y5L4 95 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 NCOR1O75376 2440 aa13.48□□□□□ -0.25
TRAPPC6B-205ENST00000555269 CCDC195A0A1B0GUA6 201 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ZNF202O95125 648 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 CYP3A5P20815 502 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 GARTP22102 1010 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 LRPAP1P30533 357 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 MCM4P33991 863 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 STK4Q13043 487 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 TMEM132DQ14C87 1099 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 KMT5BQ4FZB7 885 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 BEST2Q8NFU1 509 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ASB7Q9H672 318 aa13.47□□□□□ -0.25
TRAPPC6B-205ENST00000555269 LOC730098B7Z3J9 87 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 SPTLC1O15269 473 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 EIF3DO15371 548 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 EXTL3O43909 919 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ARPP19P56211 112 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 MRPL58Q14197 206 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 C9orf57Q5W0N0 161 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 KRBA2Q6ZNG9 492 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 STXBP4Q6ZWJ1 553 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 GPR149Q86SP6 731 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 EFCAB13Q8IY85 973 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 RDH13Q8NBN7 331 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 SFXN1Q9H9B4 322 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 TSHZ2Q9NRE2 1034 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 DPP3Q9NY33 737 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 MTRRQ9UBK8 725 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 USP25Q9UHP3 1055 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 DERAQ9Y315 318 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 CDY1Q9Y6F8 540 aa13.46□□□□□ -0.25
TRAPPC6B-205ENST00000555269 ANO9A1A5B4 782 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 PIRO00625 290 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 TBC1D4O60343 1298 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 LDHAP00338 332 aaKnown RBP13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 RPN1P04843 607 aaKnown RBP13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 MTHFRP42898 656 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 LILRA4P59901 499 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 TFAMQ00059 246 aaKnown RBP13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 CREMQ03060 361 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 RAB33AQ14088 237 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 PDXDC1Q6P996 788 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 DSTYKQ6XUX3 929 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 RNF135Q8IUD6 432 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 CBWD2Q8IUF1 395 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 GPD1LQ8N335 351 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 ZNF707Q96C28 371 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 RIPOR3Q96MK2 946 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 PLEKHA4Q9H4M7 779 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 AGPAT3Q9NRZ7 376 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 EXOC1Q9NV70 894 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 RBAKQ9NYW8 714 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 HSPBP1Q9NZL4 362 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 FBXL5Q9UKA1 691 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 BACE2Q9Y5Z0 518 aa13.45□□□□□ -0.26
TRAPPC6B-205ENST00000555269 PI4K2BG5E9Z4 385 aa13.44□□□□□ -0.26
TRAPPC6B-205ENST00000555269 M0QZQ0 153 aa13.44□□□□□ -0.26
TRAPPC6B-205ENST00000555269 SYN3O14994 580 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms