RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 CXorf38Q8TB03 319 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 ATXN2LQ8WWM7 1075 aaKnown RBP13.39□□□□□ -0.27
SYNE2-214ENST00000554928 PPP2R3CQ969Q6 453 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 POP1Q99575 1024 aaKnown RBP13.39□□□□□ -0.27
SYNE2-214ENST00000554928 CDCA3Q99618 268 aaPredicted RBP13.39□□□□□ -0.27
SYNE2-214ENST00000554928 CLSTN3Q9BQT9 956 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 TTPALQ9BTX7 342 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 DMAC2Q9NW81 257 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 C2CD2Q9Y426 696 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
SYNE2-214ENST00000554928 ANK1P16157 1881 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 VWA8A3KMH1 1905 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 ANO9A1A5B4 782 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 PIRO00625 290 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
SYNE2-214ENST00000554928 IL18RAPO95256 599 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 LDHAP00338 332 aaKnown RBP13.38□□□□□ -0.27
SYNE2-214ENST00000554928 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 BMP6P22004 513 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 KLRC2P26717 231 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 MCM4P33991 863 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 AARSP49588 968 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYNE2-214ENST00000554928 CLCN4P51793 760 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
SYNE2-214ENST00000554928 CYP24A1Q07973 514 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 PSMD5Q16401 504 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 SNRNP35Q16560 246 aaKnown RBP13.38□□□□□ -0.27
SYNE2-214ENST00000554928 ANKRD54Q6NXT1 300 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 TMEM184AQ6ZMB5 413 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.38□□□□□ -0.27
SYNE2-214ENST00000554928 HS2ST1Q7LGA3 356 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 PALB2Q86YC2 1186 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 C1orf127Q8N9H9 656 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 BEST2Q8NFU1 509 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 PIK3R5Q8WYR1 880 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 SUSD3Q96L08 255 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 MTMR12Q9C0I1 747 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 LMBRD1Q9NUN5 540 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 DPP3Q9NY33 737 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 SIX4Q9UIU6 781 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 DERAQ9Y315 318 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 NUB1Q9Y5A7 615 aa13.38□□□□□ -0.27
SYNE2-214ENST00000554928 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 MBTPS2O43462 519 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 NCK2O43639 380 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 NR3C1P04150 777 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 PRCPP42785 496 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
SYNE2-214ENST00000554928 POU5F1Q01860 360 aaKnown RBP13.37□□□□□ -0.27
SYNE2-214ENST00000554928 CAMK4Q16566 473 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 TJAP1Q5JTD0 557 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
SYNE2-214ENST00000554928 PTCRAQ6ISU1 281 aaPredicted RBP13.37□□□□□ -0.27
SYNE2-214ENST00000554928 GUF1Q8N442 669 aaKnown RBP13.37□□□□□ -0.27
SYNE2-214ENST00000554928 XXYLT1Q8NBI6 393 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 SMARCE1Q969G3 411 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 CCDC127Q96BQ5 260 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 EEF2KMTQ96G04 330 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 BORCS6Q96GS4 357 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 EMILIN2Q9BXX0 1053 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 S1PR5Q9H228 398 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
SYNE2-214ENST00000554928 M0QZQ0 153 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 BIN1O00499 593 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 PDXKO00764 312 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 KIAA0391O15091 583 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 TGM5O43548 720 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 EXOC3O60645 756 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 ITGB3P05106 788 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 DLATP10515 647 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 LILRA4P59901 499 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 ELAVL2Q12926 359 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 MRPL58Q14197 206 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 BMS1Q14692 1282 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 PSMD6Q15008 389 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 ZNF658Q5TYW1 1059 aaPredicted RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 LILRA6Q6PI73 481 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 SMRP1Q8NCR6 262 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 CASP10Q92851 521 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 CCDC47Q96A33 483 aaKnown RBP13.36□□□□□ -0.27
SYNE2-214ENST00000554928 ELMO3Q96BJ8 720 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 GSDMAQ96QA5 445 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 INTS13Q9NVM9 706 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 STK39Q9UEW8 545 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 AGAP1Q9UPQ3 857 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 TRAF3IP3Q9Y228 551 aa13.36□□□□□ -0.27
SYNE2-214ENST00000554928 TRIM49BA6NDI0 452 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 XPOTO43592 962 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms