RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 HIDE1A8MVS5 230 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 BIN1O00499 593 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 PPEF2O14830 753 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 EXOC3O60645 756 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 B3GAT3O94766 335 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 URODP06132 367 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 NR2F2P24468 414 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 AARSP49588 968 aaKnown RBP eCLIP11.59□□□□□ -0.55
CNIH1-204ENST00000554683 PMS1P54277 932 aaKnown RBP11.59□□□□□ -0.55
CNIH1-204ENST00000554683 DSG1Q02413 1049 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 PSMD6Q15008 389 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 EDRF1Q3B7T1 1238 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 ISM2Q6H9L7 571 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 CENPPQ6IPU0 288 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 DCLRE1AQ6PJP8 1040 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 TAS1R1Q7RTX1 841 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 BEST2Q8NFU1 509 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 CXorf38Q8TB03 319 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 AUTS2Q8WXX7 1259 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 MTMR12Q9C0I1 747 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 NGRNQ9NPE2 291 aaKnown RBP11.59□□□□□ -0.55
CNIH1-204ENST00000554683 CHST7Q9NS84 486 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 IRAK3Q9Y616 596 aa11.59□□□□□ -0.55
CNIH1-204ENST00000554683 TRIM49BA6NDI0 452 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 PSMA7O14818 248 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 LILRB3O75022 631 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 TADA2AO75478 443 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 AKAP3O75969 853 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 MBD3O95983 291 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 MCM4P33991 863 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 PPP1R2P41236 205 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 BRCC3P46736 316 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 GLUD2P49448 558 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 CASP4P49662 377 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 LRRC63Q05C16 580 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 HYAL1Q12794 435 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 ELAVL2Q12926 359 aaKnown RBP11.58□□□□□ -0.56
CNIH1-204ENST00000554683 RTP2Q5QGT7 225 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 C9orf57Q5W0N0 161 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 LMBRD2Q68DH5 695 aaPredicted RBP11.58□□□□□ -0.56
CNIH1-204ENST00000554683 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
CNIH1-204ENST00000554683 RBM43Q6ZSC3 357 aaKnown RBP11.58□□□□□ -0.56
CNIH1-204ENST00000554683 TMC7Q7Z402 723 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 WDR49Q8IV35 697 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 GPR65Q8IYL9 337 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 MRPL43Q8N983 215 aaKnown RBP11.58□□□□□ -0.56
CNIH1-204ENST00000554683 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 OR5B17Q8NGF7 314 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 PLEKHO2Q8TD55 490 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 B3GALT6Q96L58 329 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 MFSD14AQ96MC6 490 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 CGRRF1Q99675 332 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 INTS13Q9NVM9 706 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 CTNND2Q9UQB3 1225 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 C2orf16Q68DN1 1984 aa11.58□□□□□ -0.56
CNIH1-204ENST00000554683 DENND4AQ7Z401 1863 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 I3L4J1 428 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 PIRO00625 290 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 MAPK13O15264 365 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 GLP2RO95838 553 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 DLATP10515 647 aaKnown RBP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 FGFR3P22607 806 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 TKTP29401 623 aaKnown RBP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 CLDN10P78369 228 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 TFAMQ00059 246 aaKnown RBP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 STIM1Q13586 685 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 SURF1Q15526 300 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 CCDC85BQ15834 202 aaPredicted RBP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 DUSP6Q16828 381 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 USP41Q3LFD5 358 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 CEP135Q66GS9 1140 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 TTI2Q6NXR4 508 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 FOXR2Q6PJQ5 311 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 MICAL1Q8TDZ2 1067 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 PIK3R5Q8WYR1 880 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 PPP2R3CQ969Q6 453 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 SUSD3Q96L08 255 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 CDCA3Q99618 268 aaPredicted RBP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 TTPALQ9BTX7 342 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 MRPL17Q9NRX2 175 aaKnown RBP11.57□□□□□ -0.56
CNIH1-204ENST00000554683 DPP3Q9NY33 737 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 SIX4Q9UIU6 781 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 ITGA11Q9UKX5 1188 aa11.57□□□□□ -0.56
CNIH1-204ENST00000554683 FSD2A1L4K1 749 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 LRRIQ3A6PVS8 624 aaPredicted RBP11.56□□□□□ -0.56
CNIH1-204ENST00000554683 M0QZQ0 153 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 C2CD2LO14523 706 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 SYN3O14994 580 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 PER2O15055 1255 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 SPTLC1O15269 473 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 TBX10O75333 385 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 ITGB3P05106 788 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 TMEM191BP0C7N4 346 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms